| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3534 |
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| Symbol | |
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| ID | 9140252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 4564844 |
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| End bp | 4565722 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | LysR substrate-binding protein |
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| Protein accession | YP_003631546 |
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| Protein GI | 296123768 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTC ACCAGTTGCG GTACTTTCTC AAGGCGGCTG AACTCAAAAG CTTTACACTG
GCTGCCGCTG AATGTTTCAT TTCTCAGCCA TCACTCAGCC AGCAGATCAT TAAGCTCGAA
CAGGAACTGG GGCAGCCACT CTTCGAGCGT TCGGGGCGTG GTGTTGAACT CACCGAATCC
GGAAAGCTGC TGCAAAGCCG GGCCGGGCAG ATTGTTTCGC TCGTCGATCA GGCTCGGCGG
GAGATCACCG ATGATGGCGA GACAGGCCAG CTCACCATCG GCGCAATCCC CACCATTGCG
CCTTATCTGT TGCCACAGAT TGTCAGCCGG TTTCGTGAGG TGGTGCCAAG GGTGACCCTC
AAGATCCATG AAGATGTCAC CGAGCAATGC CTCAAAAAGG TTCAGGCGGG TGAATGGGAT
CTGGCAATTG CGGCTCTCCC GGTACGGATT GAGCATCTGG AAGTTGAGCC GTTATTTGAT
GAAGAGCTAT GGCTGGCGGT CCCTCCGGGG CATCGATTAT CACACTTGAC AGAAGTTCCT
GTTGAAGAGA TTGACCGCGA GACATTACTG CTGTTAGGTG AAGCTCATTG CCTGACGGAG
CACGTCGCGC AGTATTGCCG CCGGAAAGAC ATGGCACCTC TGGAAACAGG CCGCCTGGCG
CAACTGACGA CGATTATGGA GCTTGTCAGC CGGGGGCAGG GTGTGAGTTT TATTCCGAAC
ATGTGCAAGG CGTTCGATCG TGAAGGCCGC TGTGCCTATC GCCCACTTCA GGGAGACCGC
CCGCAACGCA CCATTGCCCT CGTCTGGAAC AGCTACCGCT TCCAGACGCT ACTATTAAAA
CGTGCTCTCG ATGTGATTCG CAGGGAGTTG CTGAAGTAA
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| Protein sequence | MELHQLRYFL KAAELKSFTL AAAECFISQP SLSQQIIKLE QELGQPLFER SGRGVELTES
GKLLQSRAGQ IVSLVDQARR EITDDGETGQ LTIGAIPTIA PYLLPQIVSR FREVVPRVTL
KIHEDVTEQC LKKVQAGEWD LAIAALPVRI EHLEVEPLFD EELWLAVPPG HRLSHLTEVP
VEEIDRETLL LLGEAHCLTE HVAQYCRRKD MAPLETGRLA QLTTIMELVS RGQGVSFIPN
MCKAFDREGR CAYRPLQGDR PQRTIALVWN SYRFQTLLLK RALDVIRREL LK
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