Gene Plim_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3482 
Symbol 
ID9140200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp4501253 
End bp4501966 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content54% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003631494 
Protein GI296123716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.782021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTATG CCGCCCGATT AATTGACATT CACAAGACTT ACCAACTGGG CGAGCACCTG 
GTGCGGGCCT TGCGCGGTGT CTCTGTCGAT TTTCCCGAAG GCGATTACGT GGCCATCATG 
GGTTCCTCCG GAAGCGGCAA AAGCACCATG CTCAACCTGC TGGGGGCTCT TGACCGCCCT 
ACCGATGGAC ATTACATCCT CGCAGGTCAC GATGTCAGCG AACTCGATGA CGATCAGCTC 
TCTGAAATTC GTAACAAGCT GATTGGCTTT ATTTTTCAGT CGTACAATCT GATCCCGCAA 
TACACGGTGC TCGAAAACAT TCAGGTGCCT CTGCACTACC GCACCCATCA GCGCACTATC 
AGTTCGTCCG ATATGAATCG TTGTCTGGAT CTGGCGGGAC GTGTGGGATT AGCCGAGCGT 
CTTGATCATC GACCATTCCA GCTTTCGGGT GGTCAGCAGC AGCGTGTGGC GATTGCTCGC 
GCACTCATCA ACGATCCCGA AATCATCCTC GCCGACGAAC CGACAGGAAA TCTCGATTCG 
ACAACCGAGC AGGAAATCAT GCAGCTTCTG GGCGAACTCA ATGCCGAGGG CCGCACGATC 
ATCATGGTGA CGCACGAAAA CTCCGTCGCA CGCAAAGCCA AGCAGCAGAT CATTATGAAG 
GATGGCCTTA TCGCCGGCTT TGGCCTCTTC TCGGATGATA CTCACAGCAA GTAG
 
Protein sequence
MKYAARLIDI HKTYQLGEHL VRALRGVSVD FPEGDYVAIM GSSGSGKSTM LNLLGALDRP 
TDGHYILAGH DVSELDDDQL SEIRNKLIGF IFQSYNLIPQ YTVLENIQVP LHYRTHQRTI 
SSSDMNRCLD LAGRVGLAER LDHRPFQLSG GQQQRVAIAR ALINDPEIIL ADEPTGNLDS 
TTEQEIMQLL GELNAEGRTI IMVTHENSVA RKAKQQIIMK DGLIAGFGLF SDDTHSK