Gene Plim_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3274 
Symbol 
ID9139989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4225008 
End bp4226471 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content56% 
IMG OID 
Productpyruvate kinase 
Protein accessionYP_003631286 
Protein GI296123508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACG TACTCCGTTC CGAAACGCCG TTTGCAAAAA CCAAGATTAT CGCGACAGTG 
GGTCCTGCCT GCTCGTCTCC CGAAAAACTT CGCGAGCTGG CGATTGCCGG GGTGGACATT
TTCCGGTTGA ACTTTGCTCA TGCCAAGTAC GACATTCTCG AAGGGGTGCT GGATTCGATT
CGGAAAATCT CGGTCGAACT TGGCACACCA CTGGGAGTGC TCGGTGATCT TTCTGGCCCC
AAAATTCGTC TGGGTCTGTT GCCAGAAGAT GGCATTCGCT GCCGATATGG TGCCAAGTTT
GAATTCGTCA GACAGGTTTC CGCCGGTACA GACAACCAGC TCACCTGCAC CTATGAGCAA
CTGATCGACG ATCTGAGGCC TGGCGACCGA GTGCTGCTTG CCGACGGAAC GGTCTCCATG
AAGGTTCTGG AGCAGGATGC GACGGCCGGA AAAGTGGTTT GCGAAGTCAC CCAGGCGGGC
ATGATCCGCT CCAAACAAGG GGTTAATCTT CCCGGCGTGG CGCTGAGCAC ACCTTCGTTG
ACAATCAAAG ACCGCGAAGA TCTGCAATGG GCTCTGGATC ATCAACTGGA TTATATTGGG
TTGAGCTTCG TGCGTTCCGC CCAGGATTTG CGAGATCTGC GGAAGGTGAT TGCCGAGCAT
CCCACGACGA CGCCTCCGTG GATTGTCGCC AAGATTGAAA AAGTCGAGGC GATTAATGAT
CTGGAAGCGA TTATCGGTGA GACGGATGCT GTTATGGTCG CCCGCGGTGA TCTGGGTGTC
GAAGCTGATG TGGATCGTGT TCCCGTACTT CAAAAGCGGA TTATCCGCCT ATGCAACGAG
CATCGAATTC CGGTTATTAC CGCCACACAA ATGCTCGACA GTATGCAGAA AAATGAACTT
CCCACGCGGG CTGAAGCGAC GGACGTGGCG AATGCCGTCC TCGATGGAAC CGATGCCGTG
ATGCTTTCGG GCGAGACGGC CGTGGGTGAT CATCCCGTGG CGGCTGTTTC CATGATGAGC
CGCATTGCCG GACATGCCGA GCGGCTGCTT GATCCTCATA AGTTCGTCGA CAAGTTGGCT
CTTCCCCGCA ATCGGGCCAC CGCCATTACT GAAGCGGTGG TTTGTGGTGC TGGCAATGCC
GCCGAGCAAC TGGGAGCGAA CCTGATTGTG GTCGCCACTC GCGGCGGCAA AACAGCCATG
GCGCTTTCAA GACAGCGCGG GACGGTTCCC ATTCTCGCTC TGACGGATCG ACCGGAAATT
GCCCGACGGA TGAAGCTCTA CTGGGGGGTC ACGCCCCTCG CGACAGAAGC GGTCAAGTAC
CCACCCAGCG AACTTCTGGC GTTCGTCGCC AATTACGGCA AAGAGCATGG CCTGCTCTCA
TCTGGCAGCA AGCTCGTTCT GGTCGGCAAC TCGGACTGGA ATCAGGAATA TCATGACGTG
ATGATTGTGC ATGTCATGCC TTGA
 
Protein sequence
MSYVLRSETP FAKTKIIATV GPACSSPEKL RELAIAGVDI FRLNFAHAKY DILEGVLDSI 
RKISVELGTP LGVLGDLSGP KIRLGLLPED GIRCRYGAKF EFVRQVSAGT DNQLTCTYEQ
LIDDLRPGDR VLLADGTVSM KVLEQDATAG KVVCEVTQAG MIRSKQGVNL PGVALSTPSL
TIKDREDLQW ALDHQLDYIG LSFVRSAQDL RDLRKVIAEH PTTTPPWIVA KIEKVEAIND
LEAIIGETDA VMVARGDLGV EADVDRVPVL QKRIIRLCNE HRIPVITATQ MLDSMQKNEL
PTRAEATDVA NAVLDGTDAV MLSGETAVGD HPVAAVSMMS RIAGHAERLL DPHKFVDKLA
LPRNRATAIT EAVVCGAGNA AEQLGANLIV VATRGGKTAM ALSRQRGTVP ILALTDRPEI
ARRMKLYWGV TPLATEAVKY PPSELLAFVA NYGKEHGLLS SGSKLVLVGN SDWNQEYHDV
MIVHVMP