Gene Plim_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3245 
Symbol 
ID9139960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4197267 
End bp4199339 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631258 
Protein GI296123480 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.672025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCA GGCTGCATCT GTGTGAATTC TTGCGGTGTA ACAGGCAACA AACTGTTGCT 
GCATGCCACA AACGAATGAC GAATTTTGCG GCCTGGCTGA GTTGGACAGC CGGGCTCTTG
CTGGTCTTGT CGAGCAGTTT GTTGCCAGCA CAGGAATCCC GCACCTGGAC CGATGCGACA
GGCAAGTTCA AGATTGAAGC CAAGTTCGTT TCGCTCGAAG GCACGAAAGT CACTCTGCTG
CAGACCTCGG GAGAAGAGAT CGAGATCGAT CTGTCGAAGC TGAGTCCCGG GGATCGGAAG
CACGCACAGG ATCTGGCCAA AAAGGCGAGT GAAAATCCCT TCCAGGTCAA AGAAACCAGC
CCCTTTGCCC CGAAAGCTGG CAAAAGCTCA ACCGGTGGAA GTCCTGCTGG ACCCAGCATG
CCGGATCGTA CGGCTCCCGG TGGAACAGAG CCGGCGCCCG CTGCAGGAAA TGGAACCTAC
ACGGGTCGCG ATGCGCAATT GACTTCCAGT GTGGACGGCG TGACCGAACT TCTGCTCACG
CCCCAATCCG ACAAGCTGGC TCTTCCCCGG AACGATGCCG TTGTGGATCG TAAGCTCCCC
TCGCGTGGAA TCGCTCTCCC GAAAAAAGCC AACTTCTTCG AGAAGGCCAA TAGCATGCTG
GTGCATTCCA GCAAGCCCGA GGCTGTTGTG CTGTACCACA TTGCTCCGCC CGGCCAATCT
CCCATCACTC GGGTGGTGGT GCTGAATCTG GAAACAGGAA AAATCACCGC TCAAGGCCAG
GTTCCGAATT TGTACACCGG CGTCGCTTAT GGCAGTGATG GATTGATTCT TGTGCGTCAG
GTGGAGCATC ACGGGAAAGG CAATAAAGGC CTGATGGAAG GCTGGATCGT CAAAGGCAAA
GATCTGGCGC GTGAATGGTC GTGGGAACCA GCCAAAGGCC AATCGGGCCG GGATGAGGAA
CTCGTCTGGG GCGAGATTCT GCCTGATGGC CGGGTTTTGA CAGCGAACGA AGGCGGAAAG
ATCACCTGCT GGAAAACCGA GGGGGATCAG ATGAAAGCTC TCTGGCGATT GCAGGCACAA
GGTTCGAGCA GGCCCGACGT GACCCGTGAT GGTAAGTACA TGGCGATTGC CGCCGATAAG
CAATGTGCGG TGATGGATCT AGAGTCGGGC GAGGTGGTGG CCACTGTTCC CACAACGGGG
AGACATCTTC CGTGGCCACG CATGGCGATC TCGGCAGAAC ATTCGCGCAT GGCCTGTTTT
GGATTCGACA AGATCATTGT GTGGGATCTT CAGACTGGTG AAGAGATTCG GGAGATTGCT
ACCGGGCCGA TCTCTGGTGG TGCTGCTCCC CTTTGGCTGG ATGATGACTT TCTGTTGCTG
GGTGGTCACC TGCTGGTCGA TGTGAAAAAC CAGTTGCGCC TGTGGGATTA TACCGGTGCA
GAAATGACGA CTTTTTATGA CCGGACTGGT CTCTTTGTGG TGGGTGGGCC CTCTCAATCC
AGCAGCCTGA TTCCCATTGC CTTACCACAT CCAGCAGCGA AGAATTTTCT GGCCAGAGCG
CTGCAGGATC CGAACCTGTT CATTCTCAAG GAAGGAACAC AGGTAGCGAT CGATGTCTCG
GGCATTCAGG ATGCGGCTCA GCAAGCGGCG ATCAAAGACA AGCTCACTGC CAAGCTCACT
CAGCGAGGCT TTGTGGTGGG AACTTCAGGC AGCATTATTC TCAAGGCGAG TACGGAATCC
GGCAAATCGG AGAAGATGTC GTATCGATCG TTTGGAGAGG CTCCCTGGAA TGCCAAAGAG
TACAACGTGC AGTCGTACAT CAGTCGATTG AAGTTTGTCT GGAATGGGAA GGATGTCTGG
GAAGGCTCAG GAAATAACAT TCCGGGCTTT TTGTCTCTCA GCAAAGACGA AACGATTGAG
CAGGCCCTCA AGAAGCACGA AAAGCCCAAT TACCACTTTT TCGAGCATTG TGAGATTCCC
AAGCTGCTGA CGAAACCCGC AGAGAATGCA GCCGCTGGAA GCTCTACAGC TGCGTTGGGG
AAATCGACCG TCACAATCAG CGGCTTGCAG TAG
 
Protein sequence
MISRLHLCEF LRCNRQQTVA ACHKRMTNFA AWLSWTAGLL LVLSSSLLPA QESRTWTDAT 
GKFKIEAKFV SLEGTKVTLL QTSGEEIEID LSKLSPGDRK HAQDLAKKAS ENPFQVKETS
PFAPKAGKSS TGGSPAGPSM PDRTAPGGTE PAPAAGNGTY TGRDAQLTSS VDGVTELLLT
PQSDKLALPR NDAVVDRKLP SRGIALPKKA NFFEKANSML VHSSKPEAVV LYHIAPPGQS
PITRVVVLNL ETGKITAQGQ VPNLYTGVAY GSDGLILVRQ VEHHGKGNKG LMEGWIVKGK
DLAREWSWEP AKGQSGRDEE LVWGEILPDG RVLTANEGGK ITCWKTEGDQ MKALWRLQAQ
GSSRPDVTRD GKYMAIAADK QCAVMDLESG EVVATVPTTG RHLPWPRMAI SAEHSRMACF
GFDKIIVWDL QTGEEIREIA TGPISGGAAP LWLDDDFLLL GGHLLVDVKN QLRLWDYTGA
EMTTFYDRTG LFVVGGPSQS SSLIPIALPH PAAKNFLARA LQDPNLFILK EGTQVAIDVS
GIQDAAQQAA IKDKLTAKLT QRGFVVGTSG SIILKASTES GKSEKMSYRS FGEAPWNAKE
YNVQSYISRL KFVWNGKDVW EGSGNNIPGF LSLSKDETIE QALKKHEKPN YHFFEHCEIP
KLLTKPAENA AAGSSTAALG KSTVTISGLQ