Gene Plim_3245 details

Gene Information

• Locus tag: Plim_3245
• ID: 9139960
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 4197267
• End bp: 4199339
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 55%
• Product: hypothetical protein
• Protein accession: YP_003631258
• Protein GI: 296123480

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.672025
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAGCA GGCTGCATCT GTGTGAATTC TTGCGGTGTA ACAGGCAACA AACTGTTGCT 
GCATGCCACA AACGAATGAC GAATTTTGCG GCCTGGCTGA GTTGGACAGC CGGGCTCTTG 
CTGGTCTTGT CGAGCAGTTT GTTGCCAGCA CAGGAATCCC GCACCTGGAC CGATGCGACA 
GGCAAGTTCA AGATTGAAGC CAAGTTCGTT TCGCTCGAAG GCACGAAAGT CACTCTGCTG 
CAGACCTCGG GAGAAGAGAT CGAGATCGAT CTGTCGAAGC TGAGTCCCGG GGATCGGAAG 
CACGCACAGG ATCTGGCCAA AAAGGCGAGT GAAAATCCCT TCCAGGTCAA AGAAACCAGC 
CCCTTTGCCC CGAAAGCTGG CAAAAGCTCA ACCGGTGGAA GTCCTGCTGG ACCCAGCATG 
CCGGATCGTA CGGCTCCCGG TGGAACAGAG CCGGCGCCCG CTGCAGGAAA TGGAACCTAC 
ACGGGTCGCG ATGCGCAATT GACTTCCAGT GTGGACGGCG TGACCGAACT TCTGCTCACG 
CCCCAATCCG ACAAGCTGGC TCTTCCCCGG AACGATGCCG TTGTGGATCG TAAGCTCCCC 
TCGCGTGGAA TCGCTCTCCC GAAAAAAGCC AACTTCTTCG AGAAGGCCAA TAGCATGCTG 
GTGCATTCCA GCAAGCCCGA GGCTGTTGTG CTGTACCACA TTGCTCCGCC CGGCCAATCT 
CCCATCACTC GGGTGGTGGT GCTGAATCTG GAAACAGGAA AAATCACCGC TCAAGGCCAG 
GTTCCGAATT TGTACACCGG CGTCGCTTAT GGCAGTGATG GATTGATTCT TGTGCGTCAG 
GTGGAGCATC ACGGGAAAGG CAATAAAGGC CTGATGGAAG GCTGGATCGT CAAAGGCAAA 
GATCTGGCGC GTGAATGGTC GTGGGAACCA GCCAAAGGCC AATCGGGCCG GGATGAGGAA 
CTCGTCTGGG GCGAGATTCT GCCTGATGGC CGGGTTTTGA CAGCGAACGA AGGCGGAAAG 
ATCACCTGCT GGAAAACCGA GGGGGATCAG ATGAAAGCTC TCTGGCGATT GCAGGCACAA 
GGTTCGAGCA GGCCCGACGT GACCCGTGAT GGTAAGTACA TGGCGATTGC CGCCGATAAG 
CAATGTGCGG TGATGGATCT AGAGTCGGGC GAGGTGGTGG CCACTGTTCC CACAACGGGG 
AGACATCTTC CGTGGCCACG CATGGCGATC TCGGCAGAAC ATTCGCGCAT GGCCTGTTTT 
GGATTCGACA AGATCATTGT GTGGGATCTT CAGACTGGTG AAGAGATTCG GGAGATTGCT 
ACCGGGCCGA TCTCTGGTGG TGCTGCTCCC CTTTGGCTGG ATGATGACTT TCTGTTGCTG 
GGTGGTCACC TGCTGGTCGA TGTGAAAAAC CAGTTGCGCC TGTGGGATTA TACCGGTGCA 
GAAATGACGA CTTTTTATGA CCGGACTGGT CTCTTTGTGG TGGGTGGGCC CTCTCAATCC 
AGCAGCCTGA TTCCCATTGC CTTACCACAT CCAGCAGCGA AGAATTTTCT GGCCAGAGCG 
CTGCAGGATC CGAACCTGTT CATTCTCAAG GAAGGAACAC AGGTAGCGAT CGATGTCTCG 
GGCATTCAGG ATGCGGCTCA GCAAGCGGCG ATCAAAGACA AGCTCACTGC CAAGCTCACT 
CAGCGAGGCT TTGTGGTGGG AACTTCAGGC AGCATTATTC TCAAGGCGAG TACGGAATCC 
GGCAAATCGG AGAAGATGTC GTATCGATCG TTTGGAGAGG CTCCCTGGAA TGCCAAAGAG 
TACAACGTGC AGTCGTACAT CAGTCGATTG AAGTTTGTCT GGAATGGGAA GGATGTCTGG 
GAAGGCTCAG GAAATAACAT TCCGGGCTTT TTGTCTCTCA GCAAAGACGA AACGATTGAG 
CAGGCCCTCA AGAAGCACGA AAAGCCCAAT TACCACTTTT TCGAGCATTG TGAGATTCCC 
AAGCTGCTGA CGAAACCCGC AGAGAATGCA GCCGCTGGAA GCTCTACAGC TGCGTTGGGG 
AAATCGACCG TCACAATCAG CGGCTTGCAG TAG 

 

Protein sequence

MISRLHLCEF LRCNRQQTVA ACHKRMTNFA AWLSWTAGLL LVLSSSLLPA QESRTWTDAT 
GKFKIEAKFV SLEGTKVTLL QTSGEEIEID LSKLSPGDRK HAQDLAKKAS ENPFQVKETS 
PFAPKAGKSS TGGSPAGPSM PDRTAPGGTE PAPAAGNGTY TGRDAQLTSS VDGVTELLLT 
PQSDKLALPR NDAVVDRKLP SRGIALPKKA NFFEKANSML VHSSKPEAVV LYHIAPPGQS 
PITRVVVLNL ETGKITAQGQ VPNLYTGVAY GSDGLILVRQ VEHHGKGNKG LMEGWIVKGK 
DLAREWSWEP AKGQSGRDEE LVWGEILPDG RVLTANEGGK ITCWKTEGDQ MKALWRLQAQ 
GSSRPDVTRD GKYMAIAADK QCAVMDLESG EVVATVPTTG RHLPWPRMAI SAEHSRMACF 
GFDKIIVWDL QTGEEIREIA TGPISGGAAP LWLDDDFLLL GGHLLVDVKN QLRLWDYTGA 
EMTTFYDRTG LFVVGGPSQS SSLIPIALPH PAAKNFLARA LQDPNLFILK EGTQVAIDVS 
GIQDAAQQAA IKDKLTAKLT QRGFVVGTSG SIILKASTES GKSEKMSYRS FGEAPWNAKE 
YNVQSYISRL KFVWNGKDVW EGSGNNIPGF LSLSKDETIE QALKKHEKPN YHFFEHCEIP 
KLLTKPAENA AAGSSTAALG KSTVTISGLQ