| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3241 |
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| Symbol | |
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| ID | 9139956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 4186308 |
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| End bp | 4188908 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Protein of unknown function DUF1588 |
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| Protein accession | YP_003631254 |
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| Protein GI | 296123476 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.358389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAGGG TCTTTGTCCT CGTTGCCGGA TTGTTTCTCG CGCCCTCCGC GCGGGGTGCA
GAGGATTTGA CGGCCCTGCT CAAGACCAAT TGCCTCGCCT GCCATGATGC GACGAGTCCT
TCGGGTCAGC TGAATCTCTC CGCTTTGCCA CTCCATCCGA CCGATCCACG GAATGCCGAA
GTCTGGGTGC GGATTCATGA CCGCGTTCAA TCGGGCGAAA TGCCACCCAA GGATGGCGAT
CCGATCACAC CGTCGGATCG CACCGCGCTG CTCCGCGTCA TCAACGAGGC GATCACCACC
GAGGAAGAGC GGCAAACCAA AGCCCAGGGC CGTGCCACCC GTCGGCGCCT CAACCGCATC
GAGTTCGAGA ACACATTGCG AGATCTGCTG GACGCCCCGT GGCTGCCGAT TCGCTCGATC
CTTCCCGAGG ATGCCGTCGC GCATGGCTAC AACAAAGTCG GTGATGCGCT GGATGTCTCC
CACGTGCAGA TGGCCCGCTA TCTGGAAGCC GCTGATCGGG CCCTAAACGG CGTTGTGGTC
GAACGACCGC AGTCCCCCGA GGTGCCCATC CGGAAGTATT ATGCGCGTGA ACAGAGTTCA
TTCGCCCGCA AGATGACCTT CAGCCAGTTC AACACCGCCC CGGAGCGGGC CGCATTCCCC
GTGATGGGAT ACACCGCCCA GCCCAAGGTG CGCGACGGCA CCGAGCCGAT GTCCGTCGGT
GCCGCCGATC CGGTGGCGCG GGAACTCGAA GGGATCGGTC TGGTGCAGGG GGCCTATGAA
CCGGTCGAAC CGAAGTTTGA CCAGTTCCGT GCTCCCGCTT CGGGCCGCTA CAAGTTGCGG
ATCATGGCCC ATTCGGCATG GGTTGGGCCA AATGGCTCCA ATCACAATCT CAAAAATCCC
AAGGCCATGT CGCCCAAATG GTTCATTCCC AATCTGGATG ATGTCAGCGC GGGGCGTCGC
TCCGAGCCTG TGACCATCTA TGCCGAAATG CCACCTCGGC AGTTGCGACG TCTGGGTGCA
TTCGACGTTC AGCCGGAAGC AGGTATTCAT GAGTTGGAAG TCGATCTTCT GGCAGGTGAA
ACCATCCGTC CCGACGCCTC CCGCTTCTTC CGCTCGCGCC CCGGCGAAAC ACGTTGGCAG
AATCCGTTGG CGGAGGCCGA CGGGCAACCC GGAGTGGTTT ATCGCTGGCT GGAGGTTGAG
GGTCCCATTC ACGAGATCTG GCCACCGCGG GGGCATCAAT TGCTCTTCGG CGACCTGCCG
ATTCGCCTTC CTCCGGGAAG CAAAAAGAAG AGTCAATCGG TCGAAATCGT CTCCACGGAT
CACCAGGCCG ATGCGACACG GCTGCTCAAA CAGTTCGTCG AGCGGGCCTA CCGTCGACCG
GTTCCTGAAT CGGAACAGCT CCGTTTCCTC CCCGTGATCC AGCAACAGCT CGCTTTGGGA
GTCTCCTTTC GCGAGGCGAT GATCGCAGGC TATACGGCGG TCCTCTGCTC GCCCGAATTC
ACCACCTGCC ATAGCGAACC CGGCCCGCTC GACGACTTCG CGCTCGCTTC GAGGCTCTCC
TACTTCCTTA TCAACTCCGA ACCCGATGCC GAACTTCGCG CCGTGGCCAA GACCGGTCGA
TTACGCGATC CCCAGGTCCT GCGCCAACAG ACCCAGCGCC TGCTCGACGA CCCTCGCCGG
GATCGCTTCG TGACATCGTT CATCGACTAC TGGCTCGATC AACGCAAAAT CCTCAACAAC
TCCCCTGATG CAGGCCTTTA CGGCGACTAC TATCTCGACG ACTGGCTCAC CGACTCCGCA
CTCGAAGAAA CCCGGCTCTA CTTCACAGAG ATGCTGACTG GCAACCTCCC CGTGAGGAAT
GTCATCGACT CCGATTTCAC CTTCGCCAAC GAACGACTCG CCATCCACTA CGGTCTCCCC
GCCATGGAGG GAACCACATT GCGGAAGGTG ATGCTCCCTC CCGATTCGGT ACGCGGCGGC
CTGCTCACAC AGGCCAGCAT CTTGACGGTC ACCGCCAACG GCACCACCAC CTCGCCCGTC
GTTCGCGGGG CCTGGGTCAT GGATCGCATC CTGGGTAAGA CACCGCCCAA GCCGCCCCCC
GTTCCCGCCG TCGAACCTGA TCTCCGTGGT GCCACCACCA TTCGGGAACA ACTGGCCAAA
CACCGCAATC AGGTCTCGTG CAATGGCTGC CACGCTCAGA TTGATCCACC GGGCTTCGCC
CTGGAAAGCT TCGATATCGC GGGCGGCTTC CGCACGAGAT ACCGCGCTCT GGCCGAGAAA
GAGACCCGCG TTGCCGGTCT GGCCCGCAGC GGTCAGCCCC TCCAGTTCAA GGAAGCTTTG
CCCGTCGATG CCAGCGGTCA ATTGGCCACC GGGGAATCGT TCCAGGACAT CACCCAGTTC
AAAAAACTTC TCCTCGCCGA TGAACGGCAA CTGGCCCGCA ATCTCGTCGG TCAATTCACC
GTTTATTCCA CCGGAGCACC GGTTCGATTC AGTGATCGAC CGGCGATCGA GTCGATACTC
AATGAGGCGG CGGCAAACGG CTACCGCACT GCCGATCTCA TTCACGCACT CGTCCAAAGC
CCCCTGTTTC TCAATAAATA G
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| Protein sequence | MLRVFVLVAG LFLAPSARGA EDLTALLKTN CLACHDATSP SGQLNLSALP LHPTDPRNAE
VWVRIHDRVQ SGEMPPKDGD PITPSDRTAL LRVINEAITT EEERQTKAQG RATRRRLNRI
EFENTLRDLL DAPWLPIRSI LPEDAVAHGY NKVGDALDVS HVQMARYLEA ADRALNGVVV
ERPQSPEVPI RKYYAREQSS FARKMTFSQF NTAPERAAFP VMGYTAQPKV RDGTEPMSVG
AADPVARELE GIGLVQGAYE PVEPKFDQFR APASGRYKLR IMAHSAWVGP NGSNHNLKNP
KAMSPKWFIP NLDDVSAGRR SEPVTIYAEM PPRQLRRLGA FDVQPEAGIH ELEVDLLAGE
TIRPDASRFF RSRPGETRWQ NPLAEADGQP GVVYRWLEVE GPIHEIWPPR GHQLLFGDLP
IRLPPGSKKK SQSVEIVSTD HQADATRLLK QFVERAYRRP VPESEQLRFL PVIQQQLALG
VSFREAMIAG YTAVLCSPEF TTCHSEPGPL DDFALASRLS YFLINSEPDA ELRAVAKTGR
LRDPQVLRQQ TQRLLDDPRR DRFVTSFIDY WLDQRKILNN SPDAGLYGDY YLDDWLTDSA
LEETRLYFTE MLTGNLPVRN VIDSDFTFAN ERLAIHYGLP AMEGTTLRKV MLPPDSVRGG
LLTQASILTV TANGTTTSPV VRGAWVMDRI LGKTPPKPPP VPAVEPDLRG ATTIREQLAK
HRNQVSCNGC HAQIDPPGFA LESFDIAGGF RTRYRALAEK ETRVAGLARS GQPLQFKEAL
PVDASGQLAT GESFQDITQF KKLLLADERQ LARNLVGQFT VYSTGAPVRF SDRPAIESIL
NEAAANGYRT ADLIHALVQS PLFLNK
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