Gene Plim_3169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3169 
Symbol 
ID9139883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4102582 
End bp4103424 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631183 
Protein GI296123405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTTG CGACAAACTC AGGTCATGAT ACGGACTGCG ATGCAGTCTC GTTCCCTGTA 
TCGTCAATTG GAGAGAGATC GCTGCCATCG TCTGATCGGC AGCCGAAGCT CCCGTTTTCG
TTTCGTGAAT TGACTCAAAA GCTGTTAACC TCTCCCGTCT CAGAAACGAA GTATCTCATT
TCAAGATCGG TCGCTGATCT TGTTTCTGGA TGGGCACAAG TTTATATGCA GCCCGACCAG
CATGCTGATC CTGCATTAGG AGATGGCTAC TGGGTGCGTA CTTTATATCT CGATACGCCG
GGGGCTGACA TTTATCACCG CCGAGGGGTT GGTCGCAGCC GCAAATTCCG TATTCGAGGA
TATGGGAGCT CTCCTGAACT CTGGTTGGAA ATGAAGTGGA AGCGGAAAGA AAAAGTCCGC
AAGCGTCGTA CCGTGATTCA TCAGGATCAG CTGCCGTTGA TCATGGCCAA TTCATCTCAG
GAGTATGATT GGTTTTCGAG TCGGATTGAT CGCTACCAGT TACAACCCGC CTGCCAGATC
ACTTATCGGC GACAGGCTTA TCTATGCCGG ACATCGCACG GGGTCTATCG ACTCACGCTT
GATCGCGAGG CATTTTCACA GCCGCATGAT GGCTGGAAGG CTCCTGTCGA AGCTGGAAAC
TGTCGGATTC TGAATGCGGA GAACGCCATA CTGGAATTAA AGTATCAGGG CGACTTCCCA
CTCTTCTTCA GATCGCTCGT GGAATTAATT CCTCAAGTTC CCGGCTCGTA TTCTAAGTAT
CGCCGGGCGA TTTCCACTTT GATGGATCAA TCCATGGGGG ATTCTGCATG CCCGACTGGT
TGA
 
Protein sequence
MYLATNSGHD TDCDAVSFPV SSIGERSLPS SDRQPKLPFS FRELTQKLLT SPVSETKYLI 
SRSVADLVSG WAQVYMQPDQ HADPALGDGY WVRTLYLDTP GADIYHRRGV GRSRKFRIRG
YGSSPELWLE MKWKRKEKVR KRRTVIHQDQ LPLIMANSSQ EYDWFSSRID RYQLQPACQI
TYRRQAYLCR TSHGVYRLTL DREAFSQPHD GWKAPVEAGN CRILNAENAI LELKYQGDFP
LFFRSLVELI PQVPGSYSKY RRAISTLMDQ SMGDSACPTG