Gene Plim_3154 details

Gene Information

• Locus tag: Plim_3154
• ID: 9139868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 4081985
• End bp: 4084024
• Gene Length: 2040 bp
• Protein Length: 679 aa
• Translation table: 11
• GC content: 52%
• Product: hypothetical protein
• Protein accession: YP_003631168
• Protein GI: 296123390

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCCTGC GAATCAGACG ACTCCTAATG GCTGTGACGA CTGCAAAGGG CAGGTTCGGC 
GCGACTATTC CCTTTGAAGA TGGCCTGAAT GTTCTTTGGG CTCCCAATAC AAGCGGCAAA 
TCAACAGCGA TGATGTCGAT CCTTTACGCT CTCGGTCTTG AGGGCATGCT TGGCCCCAGC 
CATCAGCCCC CACTGCCTGA CGCGATGCGA ACGCATGTCA TGACCGGTAC CAGCGAAATT 
CCGGTCGTGG AGTCGTTTGT CCGCATGGAG ATAGAGAACA GCAAAGGCGA ACGCATTACG 
GTTCAGCGTC AGGTCGAGTC GAGCAACCCC AAAGATTCCC GACAGCTTGT TCGTGTGCTG 
CTTGGCCCCT ACATGACCAA GCCAGACGGT CAGTATGAGC GTCGCGACTT TTACGTTCGG 
ACCGGACGTG CTGCTACGGA CCCATCGGGA TTTCACAGAT TCCTGGCTGA GTTCATCGGA 
TACATACTTC CGCAAATTCC TGCTGCGGAC AATGAAACTG TCCCGCTGTA CCTCGAATGT 
CTCTTTCCCT TTTTCTTCGT CGATCAAATG ACTGGCTGGC GGGACATCAA GGCGAGAATG 
CCGACGTATC TCCGCATCAT GGAGATGGGG AAGCGGAGTG CGGAATACGT GCTCAGTTTG 
GACATCTTGC GGCGGGCAAT CGACAAGCAA GAGAATGAGC GAAAGCAGGC ACAGTTGAAG 
GAAAAATGGA CAACGACTGC CAGCAAAGCT AAAGCCGTTA CCGCAGCCAG TCATGTTATA 
GTTCGTGGAA TTCCCGAAGA TCCTACAGCC ACATGGCCTC CGACGCCTCC GCTTGAATTG 
CTCATCACCG ATGGAACTAA TTGGAAGTCT GTTCGGGATA GCATCAAGTC ACTGCAAACG 
CGATTGAAGG AGATCGACGA GAAGGAAATT CCCCGTGCGG AACAGGTGGC TCAGTCGGCG 
ATCGAAGACC TTCAAAGAAC CGAAGAAGAA CTGTCTCGTC TCACCAGCCG CCTAGAAGCG 
CTGACGCGGG ACTTGATGGC TGAACGCGCT CACCGGGATT CGGTGTTCAA AAGACTCCAA 
GCACTCGCGG AGGATTACCG GAAGTATCAA GACGCGAAGA AGGTGGAGGA TCGCGGTGGA 
AACATCCCGA TTGAACTTGC CTCCGGAAAC TGTCCGACCT GTCATCAACC AATCAAAGAT 
GTTCTTCTGG AACAAGAGCA TGCCAGTCCG CCAATGACCC TCGAAGAGAA TATCCTCTTC 
ATCAGAGATC AAATTGCGAC ATTCCGGGAC ATGTACGAAG ATACGAAGGG GGTCGTCGAG 
GCCAAGGAAC GGCAACTCGA TGCAATTAGG CAGAAAATCT ACGACACGAA TTCGACAATG 
CGATCACTGA AGCACACGCT TCATTCCGGT GGTGAAGTTC CATCTGCCGC TGCGATTCAG 
GAGCGTCTGC TTCTCGAACA GTCGGCAATC TCGCTTCAAA ACGTGTCCGA CAACTTCGCG 
GAATTTGACA CCGTCTTCGA GAATCTCGCC AACGAGTGGG CAGAGATTCA ATCTCGATTG 
AAGTCATTGG CGAAAATCGG CCTCACGGAC ATGGATGAAA TGAAAATCGC ATACCTTCAA 
ACGATGTTTG TCCAACAGCT CGAAGAGTAT CAGTTCAGCA GTTTTCCGAT TGATCAAATG 
AGCATCAGCA GAGAGAGCTA TCGACCTGCG CGCAACGATT TTGATGTGGG TCTCACTTCC 
GCGAGCGACA CAATCCGAAT TATCTGGGCC TATCTCATCG GAATGCTCGA AGCGGACCGG 
AAGTTTCAGA CAAACCACCT TGGAATGCTG GTGTTTGACG AGCCTCGCCA GCAAGGCACG 
AAGAAACTCA GTTTCGATGC CTTGCTAAAG CGTGCGTCGA AATGTGCAGA GTCAAAGCAG 
CAAGTGATCG TTGCGACAAG TGAAGACAAA GAAACACTCG ATAGTATTAT CAGAGACATT 
CCGTGCCACT ATCTACAGTA CCCTGGAAAG ATACTGACGC CGATTCCCAA AAAGACATGA 

 

Protein sequence

MGLRIRRLLM AVTTAKGRFG ATIPFEDGLN VLWAPNTSGK STAMMSILYA LGLEGMLGPS 
HQPPLPDAMR THVMTGTSEI PVVESFVRME IENSKGERIT VQRQVESSNP KDSRQLVRVL 
LGPYMTKPDG QYERRDFYVR TGRAATDPSG FHRFLAEFIG YILPQIPAAD NETVPLYLEC 
LFPFFFVDQM TGWRDIKARM PTYLRIMEMG KRSAEYVLSL DILRRAIDKQ ENERKQAQLK 
EKWTTTASKA KAVTAASHVI VRGIPEDPTA TWPPTPPLEL LITDGTNWKS VRDSIKSLQT 
RLKEIDEKEI PRAEQVAQSA IEDLQRTEEE LSRLTSRLEA LTRDLMAERA HRDSVFKRLQ 
ALAEDYRKYQ DAKKVEDRGG NIPIELASGN CPTCHQPIKD VLLEQEHASP PMTLEENILF 
IRDQIATFRD MYEDTKGVVE AKERQLDAIR QKIYDTNSTM RSLKHTLHSG GEVPSAAAIQ 
ERLLLEQSAI SLQNVSDNFA EFDTVFENLA NEWAEIQSRL KSLAKIGLTD MDEMKIAYLQ 
TMFVQQLEEY QFSSFPIDQM SISRESYRPA RNDFDVGLTS ASDTIRIIWA YLIGMLEADR 
KFQTNHLGML VFDEPRQQGT KKLSFDALLK RASKCAESKQ QVIVATSEDK ETLDSIIRDI 
PCHYLQYPGK ILTPIPKKT