Gene Plim_3087 details

Gene Information

• Locus tag: Plim_3087
• ID: 9139799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3997105
• End bp: 3999165
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 56%
• Product: DNA-directed DNA polymerase
• Protein accession: YP_003631102
• Protein GI: 296123324

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATCG CGAATCCGGG TCAGAGAAGA ACTGTACGTT TCGATCCGCA GCAAGGGCGT 
GAGGTTATCA CAGGCTTTGG CGAAGAATTC GTGCTGAATT GCCCGTTCTG TCGTGACCAA 
AGAAGTCGCA TGCGTGTATC GGAGACTTAC TACCCGACTG ACCAGTCGAG ATCCCACCGC 
TGGCACTGTT TTAACGAAAG CTGCCATACA AATGGAGTAC TCGCAACTCG ATTCAATTTG 
AGAATCAGTT CTGTTTGGCG AGAGGCTCAA CGATCTTGCG CCGGGGATCT CTGGCTGCCC 
ACCACGACGG TATTAACCCC GGGCGACGCA GTGGTACCGA TAGTACTGCC GCCCGAGTTC 
CTGTCTCTGA CTGACTCGAC CTCGAATCAT GATGCGCGAA ACTATCTTAC CTCACGAAAC 
TTCGACCCCG AACAGCTCGC ACGCGACTGG AATGTGGGGT ACGTAGATGA GTCCGATTCC 
TCACAGCCCA GAATTGTCCG TCGGCTGATT ATTCCCTTCT ACCAGATCGA AACCTTAAAT 
CTTGTCGGGT GGCAGGCGCG CGCAATTGAG CAGAGTGATC AGCCGAAGTA TCTCACGGCG 
ACGGGATTCC GGAAGTCGTT ACACTTGTAT GGCATGCCGG GAGTTACTGA TCGCTCGGAG 
ATCGTTGTCG TGGAGGGTGT GACCGATGCC TGGCGGATTG GTCGGAATGC AGTTGCCCTT 
CTGGGAAAGT CGGCCAGCCA GACCCAGCTC GACCTCCTGG TGGATCTGGC CTCAAAAGCG 
TCCGCCGTCC TGGTGGCGTT GGATAGAGAT GCTGAAACCG ACGCCATGGA ATTGATTGGG 
CGATTGCAGA GACAACTCAG CTTACGAGCA GTTTCGAAAC GGGTCTTGCG CTGCCTGCCA 
CCAGATGGCC GTAAAGATTT CGGGGAATGC CGACCTGAGG AAGTTGAACA CGCCTTGAGG 
CAGGCGAGAG CGGATGCCGG GCTTCTTTCA CAGTCTGCTG GGACGATCAT CATCCCCCCC 
GCGAGGGACG TATCACGTCT TCCGATCGCC AGTGCGATTT CGCGTCCCCC GGGCATGAAC 
CCCCTCCAGG TCATCCAGCA TACGGGACGA GAGCTTACGG CGTCCGCACG ACTCGATGCA 
GCGATGAACC CGATCCTTCG AAAGATTGAG CAGCATGGAC TGCTGCTCGA TGAAAGGTGG 
AATCCTTCAT CTACCAATGA TTTGCCTGAA CTGAAGAGAA TGCGGCTTAG CGCCGCCCCG 
ACTGGAGGAC GCCTCCGTAC GCGCCTTTCG CAAAACAGAT CCCGGACAGG TCGAATTACG 
GCTTCACAGT ATTCGTGCCA GTCGATTCCC CTACGTCTAC GTCCAGCCGT CGTTGTAGGC 
GAAGGCCGGA CTCTTATCTC CGCAGATTAC CGGGCGTTCG AATGGCGTGT GGCAGCAGCG 
CTGAGCCAGG ATTCGCAGTT GCTCACTGAT TTTGGAAGTC CTGATTTTGA TCTCTATGCA 
TTCCTTGTCA GCCAATTCGA TGACTTGAAG CATGATGTCA GTTCCGCTCG GCCTATAATT 
AAAGGGGACT CGATCCAAGC ACTCTACGAT TTCATTGATG ATGGCACAGC ATCTGACGGC 
AAGACCTCTG TCGCGGAAGC CATCCAGCGG CTGTTCCCCC GGCTGATGAC CTGGCGACAA 
TCCGTGGCAG CGGAGGCTCT CAGTAGCGGG TTTGTCACGA CTCCGTTGGG GCGAGTCATA 
GACCTCACGG AAGGCCAGGA CGACTTGAAT CGCCAACGCC AAGCAGTGAA CAACCTCATT 
CAGGCCCACG CTGCTGAACT CTTCAAGCAA GCGCTGATTG CGATGGATCA GAGGCTTCCT 
CCCGGTGCCC GCATCCTACT GCCGATGCAC GACGGCGTGC TGGTAGACTG TCTGACGCAC 
CAATTGGACG CGGTCGCCCG CGGCATAAGA GCCGCCATGA CCGGATTCTC AAATCCTATG 
CCCGTTCCGC TTCAAGTGGT GATTGAAACC GGACAGAACT GGGGGGCTTT GCAGCAGTGG 
ATTGAAACAC CTTCCCAATA G 

 

Protein sequence

MRIANPGQRR TVRFDPQQGR EVITGFGEEF VLNCPFCRDQ RSRMRVSETY YPTDQSRSHR 
WHCFNESCHT NGVLATRFNL RISSVWREAQ RSCAGDLWLP TTTVLTPGDA VVPIVLPPEF 
LSLTDSTSNH DARNYLTSRN FDPEQLARDW NVGYVDESDS SQPRIVRRLI IPFYQIETLN 
LVGWQARAIE QSDQPKYLTA TGFRKSLHLY GMPGVTDRSE IVVVEGVTDA WRIGRNAVAL 
LGKSASQTQL DLLVDLASKA SAVLVALDRD AETDAMELIG RLQRQLSLRA VSKRVLRCLP 
PDGRKDFGEC RPEEVEHALR QARADAGLLS QSAGTIIIPP ARDVSRLPIA SAISRPPGMN 
PLQVIQHTGR ELTASARLDA AMNPILRKIE QHGLLLDERW NPSSTNDLPE LKRMRLSAAP 
TGGRLRTRLS QNRSRTGRIT ASQYSCQSIP LRLRPAVVVG EGRTLISADY RAFEWRVAAA 
LSQDSQLLTD FGSPDFDLYA FLVSQFDDLK HDVSSARPII KGDSIQALYD FIDDGTASDG 
KTSVAEAIQR LFPRLMTWRQ SVAAEALSSG FVTTPLGRVI DLTEGQDDLN RQRQAVNNLI 
QAHAAELFKQ ALIAMDQRLP PGARILLPMH DGVLVDCLTH QLDAVARGIR AAMTGFSNPM 
PVPLQVVIET GQNWGALQQW IETPSQ