| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3065 |
|---|
| Symbol | |
|---|
| ID | 9139777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3963016 |
|---|
| End bp | 3964707 |
|---|
| Gene Length | 1692 bp |
|---|
| Protein Length | 563 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003631083 |
|---|
| Protein GI | 296123305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.177227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCATG TTGTCACTTG TCTGTTTAAT CCTTGTCGGT ATCAGCGGAT CTGGAACAAT
TATGACCGGT TCCGTGAACA GTTGAAGGCT CCATTGACCA CCGTCGAGCT CTCATTCGAC
GGAACGTTTC ATGTGCCAGA TGCCATTCAA CTGCAAGGCG ATCCTGCAAA GCACACGCTC
TGGCAGAAAG AGCGATTGCT GAACCTGGCG ATTCAGGCTG TCCCAGAATC CTTTGATGCC
GTTGCCTGGA TCGATGCCGA CGTGCTCTTC ACGGATCCTG ATTGGCTGGA ACAAACCGAA
CAAGCTCTCG AACGATTTCC GATTGTCCAG CTTTTTGACA ACGTCGAGTT ACTCGATGCC
AGCAGGCAAC TGCTTGAACG TCGCCCGGGA GTCGTGGCCA AGTATCTCGA AACGCGGAAC
TCCTCTGTTC AATTGGCCCA CCCCGGTTTC GCCTGGGCGG CCCGAAGAAA CGCGCTCACC
GCTGGTCTCT TCGATCAGGA TGTCGTCGGT GGAGGCGACA CCACCATGCT CCATGGCTGG
TTAAAAACAC CTTCTCCATT CCTCGATGAA TTGCGATCTG CCGGATGGCG GAGGGCGATT
TCTCATTGGG AAGACCACGC TTATCCCGCA GTCAACGGTG AATTGGGAGC TTTGTGTGGC
ACCATTCAAC ATCTGTGGCA CGGTGACCGC AAAAATCGTC ATTACGTTGA TCGGATGCGC
TGGCTCACAG AGCACGATTA CGACCCTGCG ACAGACCTGA GGCTCGATGA CCAGGGGTTG
TGGACCTGGA GTTCTCACAA ACCCGCCATG CATTCGGCCA TTCGCCGCTA TTTTCAGATC
CGGCAGGATG ATGGCCCGGT TCCACCACAC GATGCGATCA GAGTTTCAAT TTCGAAAGAC
ATCGAGAATC CCGCACACCC CCCTGTCTGC ACCCCCTCAG CATCCTCAGG TGCAGTGGGC
GAAGCAAAAT CAAACGAGAT ACCAGATCGG TGGAGTTACC GCTGGCAGCG TGAGCGGGTA
AACGGCATTC GCTCACAACT TCGCGATAAC AGGCTGAGTA TCGATAAGTT GTTCGCCAAG
AATGTGGTGG CTAATCAAGG TTACCGTGTC CCACGTTCAT TAGCAGGAGA TGATCTATCA
TTTGTCCTGA AACCCAACTC CGAAAGCTGT GCCAAAAACG TCGTGGTCGT GCAAAACGGA
CAAATCCGCT TTGGACAGCA GTATGGCAAT GTGTTGGAAG AGCTGGTTGT CGATGAGAAT
GGGCAGGTAC CACCTCGGGA TTTCAAATGC TATTGCTTTG GGTACGAAGT CAAACTGATT
CAGGTCATCA ATCGCCTGAC AAAAACATTC GCTTACTATG ATCCACTTCA TTGGGAAGCG
CTCCACGATG TCTGCGGCCG CCCCTGGGAG GATCACGCAC GGCCTGAACG CTTACCCGAA
CTTCTGGCAA TGGCCCGCCA ACTTTCGAGG CTCTTTGATT TTCCTGTGCG TGTCGATGCC
TACATCACTT CTGAGAGTGT GGTCTTTGGT GAATTCTGCC TCGCTTCCGG CCTAGCACAA
AATCTCCAGC CAGCAGCCGA CGCCCTTCTG GGACGCTGGT GGCGGGAACA TTTCGACGCC
CTGGGAATTG CCGACGAATT CAGCCGCGAT GACTTTCCTC AAGCCTATCT CCCCCAGATC
CAGGCTCACT GA
|
|---|
| Protein sequence | MLHVVTCLFN PCRYQRIWNN YDRFREQLKA PLTTVELSFD GTFHVPDAIQ LQGDPAKHTL
WQKERLLNLA IQAVPESFDA VAWIDADVLF TDPDWLEQTE QALERFPIVQ LFDNVELLDA
SRQLLERRPG VVAKYLETRN SSVQLAHPGF AWAARRNALT AGLFDQDVVG GGDTTMLHGW
LKTPSPFLDE LRSAGWRRAI SHWEDHAYPA VNGELGALCG TIQHLWHGDR KNRHYVDRMR
WLTEHDYDPA TDLRLDDQGL WTWSSHKPAM HSAIRRYFQI RQDDGPVPPH DAIRVSISKD
IENPAHPPVC TPSASSGAVG EAKSNEIPDR WSYRWQRERV NGIRSQLRDN RLSIDKLFAK
NVVANQGYRV PRSLAGDDLS FVLKPNSESC AKNVVVVQNG QIRFGQQYGN VLEELVVDEN
GQVPPRDFKC YCFGYEVKLI QVINRLTKTF AYYDPLHWEA LHDVCGRPWE DHARPERLPE
LLAMARQLSR LFDFPVRVDA YITSESVVFG EFCLASGLAQ NLQPAADALL GRWWREHFDA
LGIADEFSRD DFPQAYLPQI QAH
|
|---|
| |