Gene Plim_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2956 
Symbol 
ID9139668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3825954 
End bp3826940 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content55% 
IMG OID 
ProductUncharacterized protein required for cytochrome oxidase assembly-like protein 
Protein accessionYP_003630977 
Protein GI296123199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATC TACCCTCCAT ATTTGCGTGG TTGACGCTGA TTTCGGCGTT ACCTCTCATT 
TCGATGGGGG CTGTCGTGAC GACTGTCGAT GCGGGCATGG CCTTTCCAGA TTGGCCAACT
TCGGATGGCT ACAGCATGTT GGCTTACCCT TGGCTGCAAT CGATTGGGGA GCCAGACAAG
TTTCTGGAGC ACGGGCATCG TCTGGCGGGA ATGCTGACAG GTTTTTTCGC ACTTCTACTA
TGCGGTTCAG CTTTTCTGAC ACCACAACGA CCGGCTGTTC GCATTCTGGC AACTTTGGTT
TTAGTGCTGG TGATTGCCCA GGGATTGCTG GGCGGGATGC GCGTCAGTCA GGTAAGTAAA
GTTCTGGCCA TGATCCATGG GAACTTTGCC TGCTGGGTCT TTACGGTCAT GGCGATCGCT
GTGGCAGTCA TGAGTCCTCG CTGGGCGAAT GTTGAGCGAT TGCCGACAGG CACGCGAACC
CGGGCAGCTT TTTCGGCTAC AGTCGTCCTA TGTCTGGTCT TCTTTCTGCA GTCGGTTCTT
GGAGGGATGC TCCGACATCT CGGTGCAGCT CATGCGTGGC GAGATCATCC CTACTTTGCA
TTTGTGGTTC TGGGAGTCGC TGCGATCACC TGGGTACTGA TCCGCCGACT TCATCATCCC
TGGCTCAGCA GTTGGGCCAA TCTGATGCTG CTTCTTGTGA ATGGGCAGTT CCTCATTGGA
TTGGGGACCT GGCTGTTTCG CTATGGCTGG CCAGATGCCG GGATTGTGGC CATTCAGCAG
ACGTCGGCTT TGAGTGCTTT GAGATCGCTC CACACGCTGG GAGCTGTGCT GGGTTTTATG
GGATTGGGTG TGATGATCGC ACGCTTGATT CGGACAGCCC CAGTCCACGC CCCGGTGTCA
GAAACTACAG TGGAAACAAA AACTCGCAAT AGCTCGCTGA CAACCCCACT CGATGGTTCC
AGCCGACTTG CTGGAGGTGC TGTTTAA
 
Protein sequence
MKNLPSIFAW LTLISALPLI SMGAVVTTVD AGMAFPDWPT SDGYSMLAYP WLQSIGEPDK 
FLEHGHRLAG MLTGFFALLL CGSAFLTPQR PAVRILATLV LVLVIAQGLL GGMRVSQVSK
VLAMIHGNFA CWVFTVMAIA VAVMSPRWAN VERLPTGTRT RAAFSATVVL CLVFFLQSVL
GGMLRHLGAA HAWRDHPYFA FVVLGVAAIT WVLIRRLHHP WLSSWANLML LLVNGQFLIG
LGTWLFRYGW PDAGIVAIQQ TSALSALRSL HTLGAVLGFM GLGVMIARLI RTAPVHAPVS
ETTVETKTRN SSLTTPLDGS SRLAGGAV