| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2954 |
|---|
| Symbol | |
|---|
| ID | 9139666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3823860 |
|---|
| End bp | 3824864 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c oxidase subunit III |
|---|
| Protein accession | YP_003630975 |
|---|
| Protein GI | 296123197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.179813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTCC CCATTCCGAA TTCCAAACTG GGAATGTGGC TGTTTCTGGG GACCGAGATT
ATGTTTTTCT CGGCCTTTAT CGGTAGCTAT ATCATCAGTC GAAATGGTTC TCCCGGCTGG
CCGACCGATC CGCACGTTAC ACATATCAAT GTCTGGCTGG GCGGGCTGAA TACCTTCGTA
CTGATTGTCT CCAGCTACTT TGTCGTCGTC GCTCATGAAA AGATGCTGGT GTCGAACTTC
AAGGAGGCCC GCAAATTTAT CGCCTTCACT CTGCTGCTGG GACTGGTTTT TCTTGGGATT
AAATCAGTCG AGTACGCGGG TAAGTTCGAG CACGAAATCA TCCCGGGAAA AATTCCGGAA
ACGCCGACGG AAGCGATGTT CGCCACAGCC AGCCGGCTGC AACGTGTCGT GGATCGTGAA
CTGGCAGCGA TCTTTCCTGG TTCACCTGCT GCTGACCGCC GAACTGAACT GGGCAATCGC
ATTGCCAGTG CCGGAAACGA AACCGCGACA ACCGATCCCA AGGATGCTCC CCCAGCAGGA
AAAGCTGCAA CCGTGGCACA GCTCAAGGCA CTTTCTCGCC TGAATGAAGC AGCGAGCAGT
CTGGAAAATC ATGTTCGATT CGGTTTGGCC ATGTCGGTGA CTCCCGAGCA GCTGATTGAG
TATCGGAGTT CGCCGACTCC CGGCCAATTT CCTGCGATTA CACTTGCCGA CGTGAATTCG
TTTGTGGAGT CACTGAAGAA GGATGTCGAG TTATCGCCCA TACTGGGAAA CTTTCATCCC
GCGGTGCCGA TACTCTATGG AAACCTGTTT GCTTCGAACT ATTTCCTGAT GACAGGTTTT
CACGCACTGC ATGTGATCAT CGGACTGATC ATGTTCCTGG TCCTTCTGGC GATGGGCAGT
AAGCTGGCAT TCCGGCATGC CGTGGTCGTT GAAAATGTCG GGTTGTACTG GCACTTTGTG
GATCTGGTGT GGATCTTCCT GTTTCCATTA ATCTACATTA TCTAA
|
|---|
| Protein sequence | MGLPIPNSKL GMWLFLGTEI MFFSAFIGSY IISRNGSPGW PTDPHVTHIN VWLGGLNTFV
LIVSSYFVVV AHEKMLVSNF KEARKFIAFT LLLGLVFLGI KSVEYAGKFE HEIIPGKIPE
TPTEAMFATA SRLQRVVDRE LAAIFPGSPA ADRRTELGNR IASAGNETAT TDPKDAPPAG
KAATVAQLKA LSRLNEAASS LENHVRFGLA MSVTPEQLIE YRSSPTPGQF PAITLADVNS
FVESLKKDVE LSPILGNFHP AVPILYGNLF ASNYFLMTGF HALHVIIGLI MFLVLLAMGS
KLAFRHAVVV ENVGLYWHFV DLVWIFLFPL IYII
|
|---|
| |