Gene Plim_2826 details

Gene Information

• Locus tag: Plim_2826
• ID: 9139538
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3661961
• End bp: 3662587
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 56%
• Product: RNA polymerase sigma factor, sigma-70 family
• Protein accession: YP_003630847
• Protein GI: 296123069

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACATCGG CTGCTCTCAT GTCTGCAGGA ACCGATTCGG GCTATTTGCG CGATCCGGAT 
GTGCAGCTCA TGCTCCGTGC CAAGCAGGGA GATGATGCTG CCTTTTCGCA GTTGGTGGCG 
GCTTATCAGG ATCGCCTTGT CGGGATTCTG CATCATCTGG TTCAAGATCA GCAGACGGCG 
GAAGATCTGG CCCAGGAAGT TTTTCTAAGA ATTTATCGCG CTCGCGAAAG CTATGTCGCG 
ACGGCGAGGT TTTCGACCTG GCTGTTCAAA GTCGCCAATA ATCTGGCCAG TAACTCCCGC 
CGGAACAAAG GTCGGCGAAA AGAAATCTCG CTCGCGGGGA ATGAATCCGG TTCCATGGGC 
AGTCGCCCGG AAGAACAACT GGTCGTCGAG AAATCGGCAC TCATGCCAGC CCGGCAACTC 
GACAAAGCCG AACTGCAGGC CGCTGTGCGT GCCGCCATGG AACAACTCAA CAGCCGGCAG 
CGCATGGCTG TCCTGCTCCA TAAATTCGAA GGTATGAGCT ACGCCGACAT TGCCGAAACC 
ATGGATCTCA CTCAGCCAGC CGTGAAATCA CTCCTGGCCC GTGCCAGAGA GAACCTGCGC 
GAATTTCTCG AACGGTATGT TTCGTAA 

 

Protein sequence

MTSAALMSAG TDSGYLRDPD VQLMLRAKQG DDAAFSQLVA AYQDRLVGIL HHLVQDQQTA 
EDLAQEVFLR IYRARESYVA TARFSTWLFK VANNLASNSR RNKGRRKEIS LAGNESGSMG 
SRPEEQLVVE KSALMPARQL DKAELQAAVR AAMEQLNSRQ RMAVLLHKFE GMSYADIAET 
MDLTQPAVKS LLARARENLR EFLERYVS