Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2802 |
Symbol | |
ID | 9139514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3635737 |
End bp | 3636870 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003630823 |
Protein GI | 296123045 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.358562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTCC CGAATTCTTC CTCGTCACCC CGCTTTCGTG TTGCCATTGT CGGGCTTGGT TTTGGAGCCG AGTTTATTCC CATTTACCAG CGGCATCCCG GTGCCGAGAT GTACGCCATC TGCCAGCGGA ACGAAGCCCA CCTGCATGAA GTCGGCGATC GCTTCGAAAT TGGCACGCGT TACACCAGCT ACGATGATGT CCTGGCCGAC CCCAAAGTCG ATTTCGTCCA TATCAATTCG CCCATTCCCG ATCACGCGTG GATGTCACTG AAGGCCCTGG AAGCGGGCAA GCATGTGATG TGTACTGTCC CGATGGCCAC AACAATTGAA GAGTGCGATC AGATCTGTGA AGCGGTCGCC CGGACTGGCA AGAAGTACAT GATGGCGGAA ACCGTGGTTT ATTCCCGCGA GTTTCTGTTC ATCAAGGATC TGTATCTTAA GGGAGAACTG GGCGAGATTC AGCATCTGGC GGCTTCGCAT CCTCAGGATA TGGATGGCTG GCCAGCTTAC TGGGAAAAGA TGATCCCCAT GCATTATGCC ACGCATGTCG TCAGCCCCTG TCTGGGTCTG CTCGATAAAC GGGCTGAGTA CGTGAGCTGC TTTGGTTCCG GTAAGGTTCG AGATGATATT CGTGAAAAAT CGGGCAATCG CTTTGCAGTA GAAACCTGCC ACATCAAGGT GCAGGATAGC GATGTCGTCG CTCACATCTG GCGATTCCTG TACGACGTGG CTCGCCAGTA CCGCGAAAGC TTCGATGTCT ATGGCACGAA AAAGAGCTTC GAGTGGACAC TGGTGGAAGA TGAACCCCAC GTGATTCATA CGGCAAAAAA ACCTGAACCC GAGATTCCTT CAAAAATCGA AGTTCCCGAT TTTGCCCATC TACTTCCTGA ACCGATTCGT ATGTTTACGA AAACGATTCA GGATGCTGAG CATCTTTCCT TCGTTCAGGG AGGCGGGCAC GGAGGTTCTC ACCCGCACAT GGTCCATGAA TTCCTCTCCG CTTTAGCTCA GAATCGCGAC CCCTGGCCTA ATGCCACACA GTCTGCCAAC TGGACATGTG TTGGATTATG TGCCCATCAA TCAGCACTCA AGGGAGGTGA AATTGTCAAA CTCCCGGCCT TCACTTTGAA GTAA
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Protein sequence | MSVPNSSSSP RFRVAIVGLG FGAEFIPIYQ RHPGAEMYAI CQRNEAHLHE VGDRFEIGTR YTSYDDVLAD PKVDFVHINS PIPDHAWMSL KALEAGKHVM CTVPMATTIE ECDQICEAVA RTGKKYMMAE TVVYSREFLF IKDLYLKGEL GEIQHLAASH PQDMDGWPAY WEKMIPMHYA THVVSPCLGL LDKRAEYVSC FGSGKVRDDI REKSGNRFAV ETCHIKVQDS DVVAHIWRFL YDVARQYRES FDVYGTKKSF EWTLVEDEPH VIHTAKKPEP EIPSKIEVPD FAHLLPEPIR MFTKTIQDAE HLSFVQGGGH GGSHPHMVHE FLSALAQNRD PWPNATQSAN WTCVGLCAHQ SALKGGEIVK LPAFTLK
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