Gene Plim_2793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2793 
Symbol 
ID9139505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3623202 
End bp3624647 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content60% 
IMG OID 
Productprotein of unknown function DUF1501 
Protein accessionYP_003630814 
Protein GI296123036 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.228897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTGCC ATCGTCAGGA TCAGCCAGTC AGCCGCCGCG ATCTTCTCGC GAGTGCCGGG 
ATGGGTTTTG GAAGCCTCGC ACTGGCCTCG ATGCTCTCAT CGAAGGGAAT GGCCGCCTCG
ACGGCGAGTG CACCATCGAG CGGGGTTAAG TCACCGCTGG CTGCGCGATT GCCCCATTTT
GCTCCGAAGG CGAAGAGCTG CATTTTCCTC TTTATGGAGG GTGGCCCCAG TCATCTCGAT
ACGTTTGACC CGAAGCCATT GGTCAACAAG CTGGCGGGCC AGCCTTTGCC TGATAGCTTC
GGCAAAGTTA TCACCGCCAT GGGGGAAGCC AGTGCTCCAC TTCTTGCTTC GCAGCGTAAG
TGGGCTCAGC ACGGAGAATC GGGTCTGTGG GTCTCGGACT GGTTGCCACA TACCGCCAGA
CACGCCGACA AGTTGGCCGT CATTCGCTCC TGCTGGGCTG ATGGGATCAA CCATTCGGCG
GGCGTGTGCC AGATGAATAC CGGCTCGATC CTCGGAGGGC GGCCTTCTCT CGGTAGTTGG
GTGACGTACG GCCTGGGGAC AGAAAACACC GATTTGCCGG CTTTTGTTGT CATGCAGGAC
AATGTCTCGC AGGTGGTCAA CGGGCCGCGC AACTGGAGTG CTGGTTTCAT GCCGGCCCTC
TATCAGGGGA TTCGGATTGA AGGGGGGCAG GATCCCATCC CCAACCTGAT GACCCCTGCG
GGAAAAACCG CCAGCCAGCA GCAGGGGAAG CTCGCTTTTC TCAATCAGAT GAATCGCGAT
TTCGCCGGTC GGCATCCCCA GCAGACCGAA CTGGATGCCC GCATTGAAAG CTATGAACTC
GCTTTCCGCA TGCAGGCCGA AGCCCCTCAG GCGATTGATC TGGGAGAAGA GACCGAAGCG
ACTCAAAAGC TGTATGGCCT CGACCGGAAG GAAACCGCTT CCTATGGCCG ACTATGCCTG
CTGGCGAGGC GGCTGGTCGA GCGGGGGACG CGCTTTGTGC AGCTCTATCA TGGAGCCGGC
AGCAAATGGG ATGCTCACTC GGGGATCGAG AAAAATCACA CGTCGCTGTG TGAAGCCATG
GATTTGCCGG TGGCGGGTCT TCTGGAAGAT CTATCCGCGC GGGGGCTACT GGATGAAACG
CTGGTCATCT GGGGAGGCGA ATTTGGCCGC ACACCGATGA GCGAACAGGG GAACGGCCGC
GACCACAACC CGACGGGGTT CACGATGTGG ATGGCGGGAG GCGGCGTTGC TGGCGGGCAG
ACGATTGGCG AGACGGATGA AGTGGGCCTG CACGCGGTCT CGCAGAAGAT GCACGTCCAC
GACCTGCACG CGACGATCCT CCACCTGATG GGCCTGGGCC ACATGGACCT CGTCTACCAA
TACAAAGGCC GCCCCGAACG CCCCACGCTC AACGAGGGTC ATCCGTATGT GAAGATTACA
GGGTAG
 
Protein sequence
MFCHRQDQPV SRRDLLASAG MGFGSLALAS MLSSKGMAAS TASAPSSGVK SPLAARLPHF 
APKAKSCIFL FMEGGPSHLD TFDPKPLVNK LAGQPLPDSF GKVITAMGEA SAPLLASQRK
WAQHGESGLW VSDWLPHTAR HADKLAVIRS CWADGINHSA GVCQMNTGSI LGGRPSLGSW
VTYGLGTENT DLPAFVVMQD NVSQVVNGPR NWSAGFMPAL YQGIRIEGGQ DPIPNLMTPA
GKTASQQQGK LAFLNQMNRD FAGRHPQQTE LDARIESYEL AFRMQAEAPQ AIDLGEETEA
TQKLYGLDRK ETASYGRLCL LARRLVERGT RFVQLYHGAG SKWDAHSGIE KNHTSLCEAM
DLPVAGLLED LSARGLLDET LVIWGGEFGR TPMSEQGNGR DHNPTGFTMW MAGGGVAGGQ
TIGETDEVGL HAVSQKMHVH DLHATILHLM GLGHMDLVYQ YKGRPERPTL NEGHPYVKIT
G