Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2733 |
Symbol | |
ID | 9139445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3542740 |
End bp | 3544332 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003630755 |
Protein GI | 296122977 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.735957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGTT CAGCCACTCC TGAAGAACGA TCTGCCTCTC CCACATTACG CCGCTGGATC TGGCCTGGAG TGACGCTGCT GCTGGCAGGA GTCGCTCAAA CAGCACTCTA TCTGACGTAC AGTGAAGATC GCACCATGCT CATCATGACG ACGCTCTTCG TCTGGCCAGC GACGATTTTC TCATTGTTGC TCTGGTGGGT TTTCGGCTCT GGATTCACCT GGAAGTCGCG TCTTATTGGT TTAGGAAGCC TGCTCTTCGT TGGCGGGCTG GTGATGTCAG TCGCCACGAT TGAAGGCTTC AATGGCGATA TGGTGCCTCG CGTCGTGTGG CGTTGGGCCC CCAAAGCGGA AGCTGCTGCC CGAAACGTTC CTGTCGCTCC TCAAGAGGGA GCTGTTGCCA CACCTGTTCT CACCGCCGGG CCGGGAGACT GGGTTCAATT TCGCGGGCCG GATCGCGCGG GTGTGGCCTC CGGAGTGACT ATCCCTCTGT CTTGGAGTGA AGCCACTCCT CCGAAGAAAC TTTGGGGCAA GCCGATTGGT GTCGGCTGGT CGAGCTTTGC CGTCATTGGA GACCGGATCT TCACGCAAAC GCAGGTCGAG CAGGAAGAGC AGGTGCTCTG CCTCGATCTG GCCACGGGCA ACGTTCTCTG GAAGCATGCC GATCAGACCC GCTTTTCGGA AGCGATGGGT GGTGACGGCC CCAGAGCCAC TCCCACGTTT CTCGAAGGCA AACTGTATAC TCTCGGTGCG ACTGGCATAC TGAACACTTT CGATGCGGCT ACAGGAAAAG TTTTGTGGTC GACGAACATT CTCAAGGATG CCGACGCCAC CAATATCCCC TGGGCCATGG CCGGTTCACC TCTGATTGAA GATGGCCTCG TCATTGTCAA TCCTGGTGGA AAAGACGGCC ATTCGATTGC TGCGTATCGT GCGACGGATG GCCAGCTCAT GTGGTCTGTC GGCGATTACG AAGCCAGCTA CACAGCGCCA CGGGTGGAGA CGATTCACGG CGTTCGCCAG GTTCTCGTCT TCCATGCTGC TGGTCTTTCC GGGCTGGATC CAAAAACTGG CAAAGAATTC TGGATGTTCC CCTGGGTCAA CCAGCCCAAG GTCAACGCCT GCCAGCCGAT TCTCCTCCCT GATCAATCGC TCTTTCTCTC CTGCGGCTAC TCGGTGGGGA GTGCCCGAAT CGAGCTCACA CCTGCCGAAC CTTCGTGGCA GGTCAAACCA ATCTGGAAGA CCAATAAATT CCGGTTGAAG TTCAACGATG GAATTCTCAA AGACGGCTAC ATCTATGGCC TTGATGAAAA CCGCCTCGCC TGCCTCGACA TCGCGACGGG AAAGATCAAG TGGAAGGGCC CACCTTATGG CTATGGTCAG ATCCTGATGA CAGATAACTC GATCCTCGTC AGTTGTGAAA ATGGCGAGCT GGCACTCGTG GAACCAACTC CCGAAAAGTT TGTCGAAATC ACGAAGTTCC GTGTTCTACC CGATGCAACC ACCTGGGCTC ATCCGGTCAT CGCCCACGGC AAGCTCCTCG TACGCAACAA TCAGGAACTC GCCTGCTATC AGGTGGAAAC CCCGCCTCAA TAG
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Protein sequence | MSGSATPEER SASPTLRRWI WPGVTLLLAG VAQTALYLTY SEDRTMLIMT TLFVWPATIF SLLLWWVFGS GFTWKSRLIG LGSLLFVGGL VMSVATIEGF NGDMVPRVVW RWAPKAEAAA RNVPVAPQEG AVATPVLTAG PGDWVQFRGP DRAGVASGVT IPLSWSEATP PKKLWGKPIG VGWSSFAVIG DRIFTQTQVE QEEQVLCLDL ATGNVLWKHA DQTRFSEAMG GDGPRATPTF LEGKLYTLGA TGILNTFDAA TGKVLWSTNI LKDADATNIP WAMAGSPLIE DGLVIVNPGG KDGHSIAAYR ATDGQLMWSV GDYEASYTAP RVETIHGVRQ VLVFHAAGLS GLDPKTGKEF WMFPWVNQPK VNACQPILLP DQSLFLSCGY SVGSARIELT PAEPSWQVKP IWKTNKFRLK FNDGILKDGY IYGLDENRLA CLDIATGKIK WKGPPYGYGQ ILMTDNSILV SCENGELALV EPTPEKFVEI TKFRVLPDAT TWAHPVIAHG KLLVRNNQEL ACYQVETPPQ
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