Gene Plim_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2704 
Symbol 
ID9139416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3512025 
End bp3513296 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content53% 
IMG OID 
Productflagella basal body P-ring formation protein FlgA 
Protein accessionYP_003630726 
Protein GI296122948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.419897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTCG ACATTCCGGC GAAAATTCGG CTGCACTTTC TACTCCCGGC GAAATTCATC 
GCCTGTGGGA TGTTGTATGC ATGTCTCGCT GGAAGCTGGC AGAATTCGTG CATTGCCGAA
CCACCTGTCA CAAAGGTTGA GACACCATCC ACTCTCAACT CGTTGGGACA GAGTACCGCT
GCGCAAGCTT CGGCAGTCAT CAGCTTGAAA GAGCGAGTTT CGACAACACA AACACTTGTC
ACCTTGAATG AAGTGGCAGA AATCCTTTCG AGCGATGACG CATTTCGAGA GACCTTGGGA
AATACCCCTT TAGGGCCAGG GCCGGGAGTG GGTCGCCCCG TGATGTTTGA CCATCTGCAG
GTTCATCAGC GGCTTCTGGC CATGGGGATC AATCTGTCGC GAATCGAATT TTCCGGCTCA
GCACGAACAG TGGTATCTCG CAGTGCCGGC GAAGAACGTA CTCTGCAAGT GATTCAACAG
GTAACTCATG TCGAGCCACA GCCAGTGATT CGCGTTGATC GTGGTAAGGT GGAAGCCCTA
TTAGTCACTG CATTTCGTGA GCAGTTTCGC TGGGGTGACG AAGCGGCCAT GCCCATTGTG
ACGATTTCTC CCCATGAAGC CACACCTCCG ACTGTGCTCC AGGCAGTAAC AGATGGCGCA
GCCATTCGAT ATCTGGCAGA AAAAATTGAC AATCTCCCCG AACAGGCCAT TCATGCCCAG
ATTATGTCCT CTCAAGGTGG AGAGCCACAG AACGTGACTT TGAAGCTGAA ATTGACTCCA
CAAGTTCGCA TGGTGGCTTT TCGACGAGCC ATGCAGAAGG GCGAAATTGT GCAGCAAGGT
GATTTGATGT GGAAGCTCGA TACTGCACAG GCTGAATGCT GCACTGAACC CGGGCAAGTG
ATTGGTATGG AGTGCCGGCG AGCGACGAAA GCCGGTGAGT TAGTGAATCT AAAAGACCTG
GCTTCGGCTC CACTGATTCG AAATGGCGAC ATCGTAACAG CCTCATTACG AGTCAAAGGG
ATTGTGATTC GCGGGCAATA CAAAAGCCTT TCAACGGCTG CGCGGGGTGA GACAGTGACA
CTCGTTTCTC TCGATGATGT GCGTGAACGG GTGACAGCTG TGGCGACAGG CTGGCACGAG
GCAGCCATCA CTTCGACAGG TGGCGAAGGT GCAAATACTT CGCAAATGCG GGGTGTCCAA
TTGTTGAAGA CTTCTCCTCA GGAAGAGCCA CCCACGAGAT CGACGCCGAG CCGACAAGGG
GGAAGACCAT GA
 
Protein sequence
MVLDIPAKIR LHFLLPAKFI ACGMLYACLA GSWQNSCIAE PPVTKVETPS TLNSLGQSTA 
AQASAVISLK ERVSTTQTLV TLNEVAEILS SDDAFRETLG NTPLGPGPGV GRPVMFDHLQ
VHQRLLAMGI NLSRIEFSGS ARTVVSRSAG EERTLQVIQQ VTHVEPQPVI RVDRGKVEAL
LVTAFREQFR WGDEAAMPIV TISPHEATPP TVLQAVTDGA AIRYLAEKID NLPEQAIHAQ
IMSSQGGEPQ NVTLKLKLTP QVRMVAFRRA MQKGEIVQQG DLMWKLDTAQ AECCTEPGQV
IGMECRRATK AGELVNLKDL ASAPLIRNGD IVTASLRVKG IVIRGQYKSL STAARGETVT
LVSLDDVRER VTAVATGWHE AAITSTGGEG ANTSQMRGVQ LLKTSPQEEP PTRSTPSRQG
GRP