| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2642 |
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| Symbol | |
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| ID | 9139353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 3426373 |
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| End bp | 3427314 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003630665 |
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| Protein GI | 296122887 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATC GTCCCATGGG TTGTACGCGT CGTGATATGC TTCGAGTTTC AGGGCTGGCA
GTGGCCGGCA TGGCTTTTGG ATCGATGACA GCGACACGGT CAGTGGCGGC AGCTTTACAG
ACATCGGCCA GTCCGTTTGA AATTTCACTG GCTCAGTGGT CATTGCATAA GGCTTTCTTT
GACAAGAAGG CTGACCCCAT GGACTTTGCG AAGATCGCGA AAGAAGAATT TGGCATTAAC
GCCATTGAGT ATGTGAATCA GTTCTACAAA GGCAAAGCCG AAGACCAGGC CTTCCTGGCT
GACTTGAAGA AGCGCGCAGA CGATCATGGG GTGAAGAGCC TGCTGATCAT GTGCGATGGG
GAAGGGGCTC TGGGTGACGC CGACGAAGCG AAACGCAAAA AGGCTGTCGA GAATCATTAC
AAGTGGGTGG CTGCCGCCAA GTATCTGGGT TGCCACTCAA TTCGAGTGAA TGCACAGAGC
GGTGGATCGT ATGATGAGCA GTTGGCACGT GCTGCTGATG GCCTGCGTCG GCTCACCGAA
TTTGCGGCGA CTCACGATAT CAATGTGATC GTGGAAAACC ATGGCGGGCT CTCTTCAAAT
GGTGCCTGGC TGGCTGCTGT GATGAAGAAG GTCGATCATC CCCGCTGCGG GACTTTGCCT
GACTTCGGGA ATTTCCGTGT CAGCAAAGAT GAGATGTATG ATCGCTACAA AGGTGTTGAG
GAATTGATGC CCTTTGCCAA AGCTGTCAGT GCGAAGTCTC ACGACTTCGA TGCGGCTGGC
AATGAGATCC ACACCGACTA TCGCAAGATG ATGAAGATTG TGGCCAGCTT TGGTTACAAA
GGCTATGTCG GTATTGAATA TGAAGGGAGT AAAATCTCCG AAGCTGACGG GATCAAGGCG
ACTAAGAAAC TGCTTGAAAC TGTACGCAGT GAGATGGCGT AG
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| Protein sequence | MSDRPMGCTR RDMLRVSGLA VAGMAFGSMT ATRSVAAALQ TSASPFEISL AQWSLHKAFF
DKKADPMDFA KIAKEEFGIN AIEYVNQFYK GKAEDQAFLA DLKKRADDHG VKSLLIMCDG
EGALGDADEA KRKKAVENHY KWVAAAKYLG CHSIRVNAQS GGSYDEQLAR AADGLRRLTE
FAATHDINVI VENHGGLSSN GAWLAAVMKK VDHPRCGTLP DFGNFRVSKD EMYDRYKGVE
ELMPFAKAVS AKSHDFDAAG NEIHTDYRKM MKIVASFGYK GYVGIEYEGS KISEADGIKA
TKKLLETVRS EMA
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