Gene Plim_2610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2610 
Symbol 
ID9139321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp3385428 
End bp3386189 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630633 
Protein GI296122855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGCC AGGAAGTGGG TCATCCTGTC GATTCTGAGA AACTCAGGCA CCCCGCTGGT 
GGCCGACGGG AGTGGCTTTC GACGTTGCGC TACGGGCTGA TTGTCGTGCT CGTGGGTTAT 
CTGGCTGTGG CTTACGTCAT TTTGCCCATG GGGTGGCGGC GGTATGAGAA GCGGCATCCG 
GCTTTGACGA ATGCCCCCAC GCTCACACAC ACCAAGCTCG GAATTCCCGG TGATCCGTTG 
AATGTGGGTT TTGTGGGGAG TGAAGAGCAG TTAATCAAAG CTTTTCATGC CATCGGCTGG 
ACAGAAGCTG AGAAGATTGA TCTGAAATCG AGCGTGGGGA TTGCCGAGAG CACTGTGCTT 
GACCGTCCGG ATGCTGTCGC TCCGGTGAGC AGTTTGTACC TGTTCGGCCG TAAGCAGGAT 
CTCGCCTTTG AATTGCCCGT GGGAGAGAGT GCCCGCCAGC GGCATCATGT GCGATTGTGG 
CGCTGTGAAG AAAAAGACGA TCAGGGCAGA CTCTTTTGGA TCGGGAGTGT GACATTCGAT 
GAGCGGGTGG GATTGAGCCA TACGACGGAA GAGATCACCC ACCATATCAG TCCTGATGTC 
GATGGTGAGC GAGATGGGCT GTTGAATTCC ATGCTCAAGG CCAAGCAGAT TGAGGCGATT 
CAATATGTGG ATGATTTTCA ACCTCAAGCC CAGGGGAAGA ATGGCGGTGG AGATCCCTGG 
AAGACCGATC AGCGATTGGG CTGGGGTACG TTGATCGATT GA
 
Protein sequence
MVSQEVGHPV DSEKLRHPAG GRREWLSTLR YGLIVVLVGY LAVAYVILPM GWRRYEKRHP 
ALTNAPTLTH TKLGIPGDPL NVGFVGSEEQ LIKAFHAIGW TEAEKIDLKS SVGIAESTVL 
DRPDAVAPVS SLYLFGRKQD LAFELPVGES ARQRHHVRLW RCEEKDDQGR LFWIGSVTFD 
ERVGLSHTTE EITHHISPDV DGERDGLLNS MLKAKQIEAI QYVDDFQPQA QGKNGGGDPW 
KTDQRLGWGT LID