Gene Plim_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2604 
Symbol 
ID9139315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3376953 
End bp3378101 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content54% 
IMG OID 
Productsignal peptide-containing protein 
Protein accessionYP_003630627 
Protein GI296122849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGGAA TCTGTTGGGC AGCGCTGATG GCGGGTTGTT TCGTTTTACC GGTGTCGTTC 
GAGGCGAGTG ACATTGTGCA TCCTGTTTCG TCGACTTGTG AAGGGGCGGA GGAGGGGCTC
GCCGCAAACG TTGATCAGTC ACGGGCCAAG GCGATCGAAT TCCTGAAAAC TTCGCAGATG
AAGGATGGGA GTTGGACGAC GCCGCGTACC TCGGGGATTA CGGCTCTCGT GGTTTATGCG
TTGATTGATG CGGGTGTGCC GGTGACTGAT CCTGTGGTGG CTAAGGGATT ACAGCGGATC
GCAGGTTATG CCCAGCCAAC GGGAGAAATT GCCGCCCCTG GCAGCCCGCA TGCGAGTTAT
GAAACTTCGG TTTCCGTGAT GGCGTTAGTT GCTGGTAATG CCGAGGGACA GTTCACGGAG
ATCATCAAAA AGGCGGAGCA GTATTTGCGT GGCGCTCAAT ATAGTGAGGC GAACAATACC
GACAAAGCCG ACATCGCCTA CGGCGGTGCG GGCTACAAAG CGGGCGGTGG TAAGCCCGAT
CTGTCCAACA CGGTCTTTTT TCTGGATGCT CTCAAGGCGA CAGGCGCGAC TGAACAAGAC
CCGGCCGTCC AGAAGGCCCT GGTTTTTCTG TCGCGATGTC AGAACCTGGA ATCTGAGCAT
AATACGACTC CGCAAGCTGC CAAGATTAAT GACGGAGGTT TCTATTACAA CCCCAATGGC
CCCGGTGTTT CGCCTGCGGG ACAATCCGAT GAAGGGGGCT TGCGGTCGTA TGGAAGCATG
ACTTATGCCG GATTTAAGAG CATGCTCTAT GCAGGCTTAA AGGCGGATGA TCCGAGAGTT
AAAGCGGCCC TCGACTGGAT CAGTAAAAAC TATACGCTGG AAGAGAATCC GGGGCTGGGC
GCGGGTGGTC TTTACTACTA TTACTATCTG TTTGCCAAGG CGATGGAAGC AAATGGTGTC
AATGAGTTTA CTGATGCCAA GGGAGCAAAA CATAACTGGA GGAATGAGCT GGCTCTTCAG
TTGATTGCAC TCCAGAAAGC CAATGGAAAC TGGCTGAATG ATCGTTCGAG CCGATGGATG
GAAGGCGACC CGAATCTGGC GACAGCTTAT GCGCTGGTGG CACTCAATCG ATGTGTGGGA
AGAAAATGA
 
Protein sequence
MRGICWAALM AGCFVLPVSF EASDIVHPVS STCEGAEEGL AANVDQSRAK AIEFLKTSQM 
KDGSWTTPRT SGITALVVYA LIDAGVPVTD PVVAKGLQRI AGYAQPTGEI AAPGSPHASY
ETSVSVMALV AGNAEGQFTE IIKKAEQYLR GAQYSEANNT DKADIAYGGA GYKAGGGKPD
LSNTVFFLDA LKATGATEQD PAVQKALVFL SRCQNLESEH NTTPQAAKIN DGGFYYNPNG
PGVSPAGQSD EGGLRSYGSM TYAGFKSMLY AGLKADDPRV KAALDWISKN YTLEENPGLG
AGGLYYYYYL FAKAMEANGV NEFTDAKGAK HNWRNELALQ LIALQKANGN WLNDRSSRWM
EGDPNLATAY ALVALNRCVG RK