Gene Plim_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2581 
Symbol 
ID9139292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3352288 
End bp3353253 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content54% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003630605 
Protein GI296122827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGGC AGTCGATTTC GAGATTACTG AAGCAGTCTT TATTCATCGC AGGTTTCAGT 
TGGCTACTCC TCTCCTCTAC GGTGACTCAG GCTGAATCAC CCGTGGTGCG TGTGATGAGC
TACAACTTGT GGCATGGAGG TGATGCCGGG AAGCAACCGC TGGAACAGAC CGCCAAGGTG
ATTCGTGAAG CCCGGGCCGA TCTGGTGGGA TTGCAGGAGA CGCGTGGCTA TGCGACCGGC
GGACAACCTC GGCCTGATCG AGCCAAGGAG ATTGCCCAGA TCCTCGGTTG GAATTACTTC
GATCAGGGTG GAGGCACAGC GATTTTGAGC CGCTATCCCA TTGGCAAAGC CTCACCGGGA
AAATGGGGTG TCGAAATTGA ACATCCCAGT GGTACGAAGC TGTATTTGTT CAATGCCCAC
CTCATGTATA TTCCGTACCA GCCCTATCAG TTGTTGAATA TTCCTTATGG TGATTACCCG
TTTATCAAGA CCGAGCAGGA AGCGATCGAC TTCGCGAAAA AGGCCCGCGG TGAGCAGGTC
GAGCGTCTGA TTGCGGATAT CAAAGCCACA GTTCCCGCTG ACGCTACAGT TTTTGTGACT
GGCGATTTCA ATGAGCCATC GCATTGGGAT TGGACAGCAG CAGCTCAAAA GGCTGGCCGC
TGCCCGATCG CTGTGAAATG GCCATCGACC AGCATGATGG CAGAGACAGG CTTCATTGAC
ACCTACCGCG AAGCCCATCC CGATCCGGTC ACTGCACCCG GAATCACGTG GACACCGCTC
ACGAAGATCA CCGATCCCAA AGATCGCCAC GATCGCATTG ATTTTGTGCT GATGCGTCAG
GGAGGTGGCA AAGTCCTCAG TTCGCAAGTC CTGGGCGAAT CGAAAGAGGC GGCAGATGTG
GTCGTCATCC CCTACCCTTC AGATCATCGC TCTGTGGTGA GTGCTGTTGA ACTGACGGGC
AAGTGA
 
Protein sequence
MNGQSISRLL KQSLFIAGFS WLLLSSTVTQ AESPVVRVMS YNLWHGGDAG KQPLEQTAKV 
IREARADLVG LQETRGYATG GQPRPDRAKE IAQILGWNYF DQGGGTAILS RYPIGKASPG
KWGVEIEHPS GTKLYLFNAH LMYIPYQPYQ LLNIPYGDYP FIKTEQEAID FAKKARGEQV
ERLIADIKAT VPADATVFVT GDFNEPSHWD WTAAAQKAGR CPIAVKWPST SMMAETGFID
TYREAHPDPV TAPGITWTPL TKITDPKDRH DRIDFVLMRQ GGGKVLSSQV LGESKEAADV
VVIPYPSDHR SVVSAVELTG K