| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2569 |
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| Symbol | |
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| ID | 9139280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 3339857 |
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| End bp | 3344005 |
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| Gene Length | 4149 bp |
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| Protein Length | 1382 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_003630593 |
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| Protein GI | 296122815 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGG GAATAACCGC CGTTCACCAG ACCAACCGGA AATGGAGATT CTGGATCGAT
GTGGGCGGAA CTTTTTCCGA TCTTCTCGCG CTTTCGCCAG AAGGTCACCC TGCACTCCTC
AAAACACTGA GCTCCGGCAG AATCAAAGGG GTTTGCCAGC GTGGCCATCC AGAACTTTTC
CAGTGGGATG ATGCTTCTCT GGGGCAGTTT CCCGCTGATT TTTTTACAGG CTACGAGTGC
CTCTGGGGAA ATCACTCCGA GGAACAAGTC CGTTCAAAAA TTGTTCGCCA TGAACAGATT
CGATTTCCTG AACCTTTGAG TGAAAGCCAC GCGACATTTT TTGCCAGATT CACGATTCAG
CCCCAGGATT CATCAGTTTC GGCTGTCATC CCCGGCGAAG GCACACTCTA TGAACTGACC
TCGCACGAAG AAGCAGCCTT TTGTGGGATT CGCCAGATTC TTCGCCTGCC CCTCTCGCAA
CCATTGCCAG AGATTGACCT ATCTTTAGGA ACAACTCGGG GCACCAATGC ACTGCTGACT
CGGAACGGGT CAAAGACGGC ACTCCTCACC ACCCGCGGAT TGGGCGATCT CCCGAAGATT
GGATCACAGG AACGGCCTCA TCTCTTCGCC TTGCAGATTG AAAAGCCGGC TCAGCTCTTC
TGCCAGGTGG TTGAAATCGA TGAACGCATC TCCGCCGCGG GCGAGATTCT CGTCCAGCCG
GATGCTCAGC AGATTCGCGA GCAGCTCCAA CAATTGCTCC AGCAGGGGAT ACAGTCGATT
GCGATCTCAT TCCTGCATGC CTGGAAGTAC CCCCAACATG AACAACTGGT TGCTCTTCTG
GCAAAAGAAG CTGGCTTCAT CGAAGTCTGC ACGTCGCATC AGACAGCCCC TTTCCCCAAA
CTTGTTCCAC GCACTGAGAC GACGGTTCTC AATGCTTATC TGACTCCTGT CCTCCGTTCG
TATCTCAACA GTCTTTCAAG AGGTCTAGAC CAAACATCTT CTCCCCAATC CCGGCAGGTG
CGGCTCATGA CCAGTGCCGG CACACTGGTC AGTGCCCACA ATTTCCGTGG AAGTGACAGC
GTGCTCAGTG GCCCGGCGGG AGGAGTTGTG GGCTTTGCCA GAGCCGCCGA AGACGCTGGA
TTTTCCAAAG CCATTGGCAT TGATATGGGC GGCACCAGCA CGGATGTGGC GATTTATGCG
GGAGAATTTC TGCGAGAGTT TGAAGGGGTG AAAGCGGGAG TCAAACTGAT TGGTGATCGA
CTGGCCATCG AAACTGTGGC AGCAGGTGGC GGAAGTGTAT GCGATCTTGT CGGTCGCCAA
CTTGTCGTCG GGCCACAAAG TGCCGGTGCT TCACCGGGCC CGGCCTGTTA TGGACAAGGC
GGCCCATTAA CCATTACCGA TTGCAATCTG TGGCTGGGAC GGATTGATAC TTCCCGGTTT
CCATTTCCAC TCGATCGAGA GGCGACCAGG CAACGACTTC ACGAAACGCT TTTGAAACTG
CAAAGCGTCA TTAATTTTGA GCAGGCAGGG ATGAAGGCGA TCGCCTCGAT TGAGGAATTG
GCGGCTGGCT TTCTCGAAAT TGCCAACGCC ACAATGGCCC GTGCCATTCG GAAAATCTCC
ATCGAAAAAG GACAAATACC CGAAGATTAT CTGCTGGTGG CCTTTGGTGG AGCCGCTCCA
CAACACGCCT GCGGTATTGC CCGATTGCTG AATATCCAAC GCGTGCTCAT TCATCCGCTG
GCTGCGCTTT TGTGTGCCTA TGGGCTCAGC CAGGCCAACG TGACTCGCCG AGGCGAACGC
CCCATTTACC AGCGATTGCA AGAGACCAGC AGTGGTGGTC AGGCCACAGA AGAAACGTTG
AATAACCTCC TGAGACTGGC TGGTGAACTG GAGGCAGATC TCCATCAACA GATTGAGCAG
GAACATCTGC CGAGCCTGGT ACTCAAACCT TTGCGGCTGG ATGTCGCACT CCGTTATGCA
GGTGCCGAGT CCGTCTTGGA GATTCGCTTG CCGGACGATC TGACAAATCT GTCGATGAGC
GATCTGGCAA ACCAGTTCCG CCGGTTGCAT CGGTCTCGAT ACGGATATGA CCGCCCTGCC
GCTCAACTCG AACTGGTGGC GCTGCGCGGT GAACTTTCGG CAACCCGGGA ACGCATTTCA
TTCCATACTG ATGTGCTGAA AGCTCATGAA GTTTCTCATA CCGCATTCAA CAAGTCGAAG
TCTCCCATGA CACAACGCTG GGGAGCACAG CGTCTATGGG TTGCGGGCAA CTGGCAACAG
GCGGATTGTT TCCCTCGGGA ACAACTGACA TCGGATGACG TGATTGCCGG CCCGGCTCTG
ATCACCGACA CGACCACCAC CACTTTTGTC GATATCGGTT ATGAAGCCCG GCGACTTCCC
GGCGGTGAAC TACTCATTTT AAAACCAGAG AAAGCAGCCC AGACCGGCTC AAGCCGCCCA
TCACAACCGC AGTTGGAAAA CTCTTCCGCA GCCACGCTCA ACGAAAAAAC TCCCGAAATT
TCACCTGTCG AAATTGAGGT CTTTCATCAA CGTCTGGCTT CCATTGCCGA CGAAATGGGG
ATCAAACTCC AGCAGACAGC GATTTCAACC AACGTCAAAG AGCGGCTGGA TTACAGTTGT
GCGATCTTTA CAAGGCTCGG TGAACTGGTC GTCAATGCCC CACATGTCCC TGTCCATCTG
GGAGCCATGA GCGAATCGGT CAAAGCCATA CTCAAGGCTC ATCCGAACAT GGAACCTGGC
GATGTCTTTC TCACCAACGA TCCTTTTGCC GGTGGCTCGC ATCTGCCCGA TCTCACGGTG
ATCAGTCCGG TCTTCATTTC TTCACTCACT GCGAACAACA AACCTTATCT GGCGGGGTTT
GTCGCCAATC GGGCGCATCA TGCCGAGATT GGCGGGATCG TGCCGGGAAG CATGCCTCCT
TTCTCGAAAT GTCTTGCCGA AGAAGGCGTT TTGCTCAGCA ATCTGCGTAT TGTGCATGGC
GGCGTGCTCG ATGAAGCGGG CCTGATGGCA CGCTGGAAGG CTCCCCCCTA TCCATCCCGC
ATGCCGGAAC AAAATCTCGC CGATCTGCAG GCACAAATTG CGGCGAACAC CCGTGGGGCT
CAACTGGTTG CCGACTTCGT GCAGGAGCAA TCCATCTCTC ACTTTGAGCT ATGCCTGAAC
CAGCTACAGC AGATTGCCTC CACCATGATC CGCCAAATGC TGGGGAAACT CCCTCCCGGC
GAGTACCCGT TCATCGATCA TCTCGACGAT GGCTCACCGA TCCAGTTGAC CTGCCGCATT
TTCAAATCGG ATTCTTCATC GAATCAAAAG GCAAACTCAC CTGCCTGCCA ACTCGATTTC
ACAGGAACGG GACCTGTTCT CAAAAGCAAT CTCAATGCCA ACCGCGCTAT TGTCACAGCC
AGTGTGATGT ACACACTTCG GTCTCTTGTC GAGTGGTATC ATCCCGATCA AGCCCACACG
CACTTTCCAC TCAACAGCGG GGTGCTTGAA CCTGTGGAGA TTGTGCTGCC CGAATGTCTG
CTCAACCCTC CTGCTCACCA CGATCCAAAG CTCGCGGCAG CTGTGGTGGG GGGAAATGTC
GAAACGTCTC AAAGGCTCGT CGATGTCCTT CTGGGTGCTT TTGGCGTCGC AGCCGCCAGC
CAGGGAACGA TGAACAACCT CACGTTTGGC AATGATCGCT TTGGCTACTA CGAGACGATT
TGTGGTGGAA CAGGGGCGAC TTCGCGAGGG CCCGGCGCAG ATGCCATTCA CTCGCACATG
ACAAATACAC GTCTGACAGA CCCTGAAATC CTCGAACAAA GATATCCGCT CAGAGTGAAA
AACTTCTCCA TTCGCCAGGG TTCTGGCGGT GCAGGCCAGT ATCGAGGTGG CCATGGTGTC
ACCCGCCAGC TCGAGTTTCT GGAACCTCTT TCTGTCTCCA TTCTTTCGGA AAGACGAGAG
GGTTTCCGTC CTTACGGTGC TGCCGGTGGA GAGCCGGGAC AACCGGGTCA GAATCTTCTC
ACACGCCAGC AAACTGGCGA AACCATCGAT CTGGGGGGCA AAGCAACCCT GCAGGTTGAA
ACAGGTGATC TGCTCACCAT CCACACGCCC GGCGGTGGCG GCTGGGGATC TCCCGATATC
TCGACATGA
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| Protein sequence | MQQGITAVHQ TNRKWRFWID VGGTFSDLLA LSPEGHPALL KTLSSGRIKG VCQRGHPELF
QWDDASLGQF PADFFTGYEC LWGNHSEEQV RSKIVRHEQI RFPEPLSESH ATFFARFTIQ
PQDSSVSAVI PGEGTLYELT SHEEAAFCGI RQILRLPLSQ PLPEIDLSLG TTRGTNALLT
RNGSKTALLT TRGLGDLPKI GSQERPHLFA LQIEKPAQLF CQVVEIDERI SAAGEILVQP
DAQQIREQLQ QLLQQGIQSI AISFLHAWKY PQHEQLVALL AKEAGFIEVC TSHQTAPFPK
LVPRTETTVL NAYLTPVLRS YLNSLSRGLD QTSSPQSRQV RLMTSAGTLV SAHNFRGSDS
VLSGPAGGVV GFARAAEDAG FSKAIGIDMG GTSTDVAIYA GEFLREFEGV KAGVKLIGDR
LAIETVAAGG GSVCDLVGRQ LVVGPQSAGA SPGPACYGQG GPLTITDCNL WLGRIDTSRF
PFPLDREATR QRLHETLLKL QSVINFEQAG MKAIASIEEL AAGFLEIANA TMARAIRKIS
IEKGQIPEDY LLVAFGGAAP QHACGIARLL NIQRVLIHPL AALLCAYGLS QANVTRRGER
PIYQRLQETS SGGQATEETL NNLLRLAGEL EADLHQQIEQ EHLPSLVLKP LRLDVALRYA
GAESVLEIRL PDDLTNLSMS DLANQFRRLH RSRYGYDRPA AQLELVALRG ELSATRERIS
FHTDVLKAHE VSHTAFNKSK SPMTQRWGAQ RLWVAGNWQQ ADCFPREQLT SDDVIAGPAL
ITDTTTTTFV DIGYEARRLP GGELLILKPE KAAQTGSSRP SQPQLENSSA ATLNEKTPEI
SPVEIEVFHQ RLASIADEMG IKLQQTAIST NVKERLDYSC AIFTRLGELV VNAPHVPVHL
GAMSESVKAI LKAHPNMEPG DVFLTNDPFA GGSHLPDLTV ISPVFISSLT ANNKPYLAGF
VANRAHHAEI GGIVPGSMPP FSKCLAEEGV LLSNLRIVHG GVLDEAGLMA RWKAPPYPSR
MPEQNLADLQ AQIAANTRGA QLVADFVQEQ SISHFELCLN QLQQIASTMI RQMLGKLPPG
EYPFIDHLDD GSPIQLTCRI FKSDSSSNQK ANSPACQLDF TGTGPVLKSN LNANRAIVTA
SVMYTLRSLV EWYHPDQAHT HFPLNSGVLE PVEIVLPECL LNPPAHHDPK LAAAVVGGNV
ETSQRLVDVL LGAFGVAAAS QGTMNNLTFG NDRFGYYETI CGGTGATSRG PGADAIHSHM
TNTRLTDPEI LEQRYPLRVK NFSIRQGSGG AGQYRGGHGV TRQLEFLEPL SVSILSERRE
GFRPYGAAGG EPGQPGQNLL TRQQTGETID LGGKATLQVE TGDLLTIHTP GGGGWGSPDI
ST
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