| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2562 |
|---|
| Symbol | |
|---|
| ID | 9139273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 3333186 |
|---|
| End bp | 3334493 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Beta-ketoacyl synthase |
|---|
| Protein accession | YP_003630586 |
|---|
| Protein GI | 296122808 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTAA AGAGCAAGAG CGCACAAGAT ATTGTCATTA CTGGCGTGGG AATTGTGAGT
CCCGTCGGAA TTGGTCTGTC GGCCTTAACA GACAATTTGC GTGCCGGGGC CACCGGAATC
TCGAAGTCGA AATTCTTCCC GGGATTCGCC AGTCCTGATG CCGTGACTGC TGAGATCGGT
GATTTCAACG AAGAAACTGC CAAAAAAATC TATCTGAAGG AAGTCCGGCG AAGCATCAAG
CTGATGTGCC GAGATATTCA GCTCGGTGTG GCCAGCGCTC TGATGGCTCT GGAAGATTCC
AAATTAAATC TCGAAACCAT CGATCATACG CGGATGGGTG TGGAGTTCGG TGCCAACCTG
ATGCTCAGCG AACCGGCTGT GCTGGGTGGC CCGGCCGTCG CGATGAGTGA AATCACCGGT
GATGCGAGTT TCAAAGGCTG GGGAGAAGCG GGCTACAGTA AAATGGAGCC ACTATGGCTG
CTCCGCTATT TGCCGAACAT GCCAGCCTGT CATATCAGTA TTGCTTCCGA TGCTCGCGGC
CCCAGCAACT CGCTGACACT CGATGAAGCT TCAGGAAATG TGGTGATCGG TGAGGCCGTC
CGCATTCTTC AGCGCGGTGC GGCAGATATC ATGATCACAG GTGCCACAGG CTCGTATTCA
CATCCAGTGC GTGCGCTGCA CCTGGCACTC GTCAAAACGT TGTTGGCCTC CTCACCGGCT
GAGCCAGCCA GAAGATCGCG ACCATTCGAA AAAGACCGAA ATGGTTTTGT GGTCGGGGAA
GGGGCTGGAA CATTGATTCT GGAAACGAGA GCCCATGCGG AGGCGCGTGG TGCCACCATC
TACGGGCGAA TCCTTTCGAC AGGAGCTGCC ACATGTGTGA ATCCTGATGG CGAACCCCGT
TACCAGGATG CGGTGAAGGG TGCTCTCAAG GCCGCCTTGA GAAGTGCGGA AATCGAACCG
ACCGATATTG GCCATTACAA CGCTCATGCG GCTGGTCTGC CAGAAGCTGA TGCCGCGGAA
GCTCGCGCGA TTAACGAAGT CTTTGGCAGC TACCGCGTGC CCGTCACCGC TCCCAAGAGT
TATGTCGGCA ACTCTTCCGC AGGCTCGGGA CTGGTAGAAT TAATGACCTC GTTAGCTGGT
GTGAAAGCAG GGTTTATCCC GCGCACTTTG AACTACGAGA CTCCCGATCC CGCCTGCGAT
GTTTCGATTG TGACAGAGCC TGGCGTGAGT CCTGCGCTGA AGACCTTTGT GTCCATGAAC
GTGACTCGCA AAGGTCAGGC AGCGGCCGTG ATTATCGAAG TGGAATAG
|
|---|
| Protein sequence | MSLKSKSAQD IVITGVGIVS PVGIGLSALT DNLRAGATGI SKSKFFPGFA SPDAVTAEIG
DFNEETAKKI YLKEVRRSIK LMCRDIQLGV ASALMALEDS KLNLETIDHT RMGVEFGANL
MLSEPAVLGG PAVAMSEITG DASFKGWGEA GYSKMEPLWL LRYLPNMPAC HISIASDARG
PSNSLTLDEA SGNVVIGEAV RILQRGAADI MITGATGSYS HPVRALHLAL VKTLLASSPA
EPARRSRPFE KDRNGFVVGE GAGTLILETR AHAEARGATI YGRILSTGAA TCVNPDGEPR
YQDAVKGALK AALRSAEIEP TDIGHYNAHA AGLPEADAAE ARAINEVFGS YRVPVTAPKS
YVGNSSAGSG LVELMTSLAG VKAGFIPRTL NYETPDPACD VSIVTEPGVS PALKTFVSMN
VTRKGQAAAV IIEVE
|
|---|
| |