Gene Plim_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2544 
Symbol 
ID9139255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3305823 
End bp3306617 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_003630568 
Protein GI296122790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0361834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAACCC GAAAACTTGC TGCAATGTTA CCATTGTTGC ACACCTCGGG GTTTTCGGCA 
GGTTTGGGGT TTGCCGCTGA TGACGCAATT CGCGGACTTG GCGGCATTCG GCAGGGAATT
GCCACCTCTT CGACTACGGA GAGCGAAGAG GTCACAGTCC AGTGTTCCGC TCATCGACAG
GGTGTGCGGA GCCGCTTCAA AGGATGGACG TTTGTCATGA AAACGGTTTT CACCACAGGC
GAGGCGGCCA AGATCTGCAA GGTCAGCCAG CAGACCATTA TCCGCTGTTT CGATTCGGGT
CAGCTCAAAG GTTTTCGAGT TCCGGGATCA CGATTCCGGC GGATCCCCCG CGATATTCTC
TATCGCTTCA TGAAAGAGAA TGGCATTCCG ACGGATGCCC TAGAAAGTGG CCGCCGCAAG
GCTCTCGTGG TGGATGACGA TGTCGAACTC GTCGAACTGA TTCGCGATGC CCTCGAAGCC
GATGGCAGGT TTGAAGTGCG AGTCGCCAAC AATGGCTTTG ATGCTGGGAT GATGGTCAAA
GAGTACCGCC CGGATATCAT CGTGCTCGAC GTGATGCTTC CGGATATCAA TGGCAAGGAA
GTCTGTCAGC GGGTGCGCAA TGATCCAGCT CTCGATGATG TGCGCATCAT CTGCATCAGC
GGGATGGTGG AAGCCGACAA GATTGACGAT CTGAAGAAAT CCGGTGCCAA CGAGTTCCTG
CAGAAGCCTT TCGAAGTCGA AACGTTGGTC GATCGGATGT GCCGCCTGCT CGATGTCGAG
CCCTCTGACA ACTAA
 
Protein sequence
MRTRKLAAML PLLHTSGFSA GLGFAADDAI RGLGGIRQGI ATSSTTESEE VTVQCSAHRQ 
GVRSRFKGWT FVMKTVFTTG EAAKICKVSQ QTIIRCFDSG QLKGFRVPGS RFRRIPRDIL
YRFMKENGIP TDALESGRRK ALVVDDDVEL VELIRDALEA DGRFEVRVAN NGFDAGMMVK
EYRPDIIVLD VMLPDINGKE VCQRVRNDPA LDDVRIICIS GMVEADKIDD LKKSGANEFL
QKPFEVETLV DRMCRLLDVE PSDN