Gene Plim_2480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2480 
Symbol 
ID9139191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp3235392 
End bp3236621 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content55% 
IMG OID 
Productprocessing peptidase 
Protein accessionYP_003630505 
Protein GI296122727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.116238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCAGC AAGCCAAACT TCCCAATGGT CTGACAATTC TGGGCGAGCA TCGCCCCAGT 
GCCCAGAGTG TTGCCTTTGG CTTCTTTGTC CACACCGGTG CCCGCGACGA AAATCATGCC
TGCGAAAGTG GTGTCAGCCA CTTTCTCGAG CACATGGTCT TCAAAGGGAC CGACAAGCTT
CCCGCCGAGA TGGTCAACCG ACTCTTTGAC GATCTTGGCT GCAACTACAA TGCCTCCACC
GGTGAAGAAG TCACCACCTT CTATGCTGCC GTCCTGCCAG AATACTTCGA AACGGTCTTC
CCGTTACAGG CGGCCATTCT CTACCCGAGC CTGCGCGAAG ACGACTTTAC CACTGAGAAA
CAGGTGATTC TGGAAGAAAT CGCCGAGTAT GCCGATCAAC CGGTTTACGT CGCCTATGAC
CATGTCATGC AGCTTCATTT CCGCGAGCAT CCCCTGGGTC AACCGATCCT TGGCACTCCG
CAGAGCATTC AGTCTTTGAC GGCTGAGCAG ATGAAGACCT ACCATCGCGA GCATTACCTC
GCAGGGAACA TCGCGCTCGT TGTTGCCGGG AATTTCGACT GGGATCAGGT TCTGGAATTG
GCTTCGAAAG AGTGCGGTCA CTGGCCCGCT GGGGAAACCG CACATCCATG TCGCTGTGCT
GCTCCAGCAG CACAAACAGT CGTTATCGCA AAACCGGCTC TCCAGCAGCA GCACATCATG
TCGATCTCTC CGGCACCGGA TTCGTGCCAT CGACTTCGAT ATGCCGCCGA GATGGTCTCG
ATTATTGTCG GAGACGATTC GAACAGCCGC CTCTATTGGG AACTGGTTGA CCCGGGCTTA
ACAGATATCG CCGAGATTTC TTACAGCGAC TATCAAGGCT GTGGTACGTG GCTCACGTAT
CTCTGCTGTG ACCCGGAAGC TGCCGAAGAC AACTGGCAGG CCGTTCGCAA AGTGCTCGAT
GAACTTAACA CCAAATCATT CACTGTGGAG GAGATGGAGC AGGCGCGCAA TCTGCTGGCA
ACAAGGCTGG TTTCGCGCGG CGAGCAACCG ATGCACCGCA TGCTGGCCAT TGGCCAGAAC
TGGCACTCCC GCATGGAATA CCGTTCTCTC GACGATGAAC TAGAGGCACT CGATCAGGTG
ACGATGGCTG ATCTGCAGAA TGTCATTCGC GAATTTCCAC TCCGTTTGAC ATCCACAGTC
TCTGTCGGTC CTAACACGGC TACACTTTAA
 
Protein sequence
MLQQAKLPNG LTILGEHRPS AQSVAFGFFV HTGARDENHA CESGVSHFLE HMVFKGTDKL 
PAEMVNRLFD DLGCNYNAST GEEVTTFYAA VLPEYFETVF PLQAAILYPS LREDDFTTEK
QVILEEIAEY ADQPVYVAYD HVMQLHFREH PLGQPILGTP QSIQSLTAEQ MKTYHREHYL
AGNIALVVAG NFDWDQVLEL ASKECGHWPA GETAHPCRCA APAAQTVVIA KPALQQQHIM
SISPAPDSCH RLRYAAEMVS IIVGDDSNSR LYWELVDPGL TDIAEISYSD YQGCGTWLTY
LCCDPEAAED NWQAVRKVLD ELNTKSFTVE EMEQARNLLA TRLVSRGEQP MHRMLAIGQN
WHSRMEYRSL DDELEALDQV TMADLQNVIR EFPLRLTSTV SVGPNTATL