Gene Plim_2303 details

Gene Information

• Locus tag: Plim_2303
• ID: 9139008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 2975489
• End bp: 2978827
• Gene Length: 3339 bp
• Protein Length: 1112 aa
• Translation table: 11
• GC content: 54%
• Product: SNF2-related protein
• Protein accession: YP_003630328
• Protein GI: 296122550

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.646715
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACATTGT CGGATTTGCT GGAAAGCAAG TTTCGAGGAG ATATCCGTTT TCGCGGAGCG 
GCCTACATTC AAGCGGAACG TGTTGCCATT AACCGCATCA CTGAAGATCA GATCTTTGGT 
GCTGTGCGAG ATGGCGTCGA ATTCGTGACG CAACTGATGC GGGATGAAGG TCAACTCAAA 
ATGAGTTGTA CCTGCATGGC TGGTAAGCCC AATCCCACCG GGCAGGCGTC TTGTAAGCAC 
GTCTGGGCCA CGATTCTCCT TGCCGAGAAG CAGGGAGTGA TCTCCTCAGG AGTTAAACCC 
GGTTTCATCC CGGCATTCAT TACCGAAGAC GAGCCACTCG ATCTGCCGGA TGAAGACTGG 
CTTGACGACG AACTCGAAGC CACACCTTCG AGAAAACTCT CGCTTTCCAA ATCAACGGCT 
GTCGCTGAAC GCCCGACACC TGTTTCGGCT CCTGCTCGTG AATGGGAAAC ACGCCTCAAA 
GAATTAAGAA CCGCCATGCA GGATGGCACC GGCAGCTATG CCGTTTCTGC CCCTGGCAAA 
GAGCGCGAAG TCGTTTACGA AGTTGACCCC GCCGCCAGTG AGGAAGCCGA ATGTCTGATT 
CTGCAAACTT CCCAACGGCA ACGACGGGCG AGTGGTCAGT GGGGAAAACT GAAACCACTC 
AAGCTCCGCC CAGGCCGTCT CGAAGAAATT GAAGACGAAG AAGATCGCAG AATTCTGGCT 
CACCTGGTCG GCGGCACCCC TGATCGTTCC AGCACCACCG GGATGATTGG TGAAATGCAG 
GCGGCCGCTT GGCGCTATCG CGTTCCTCAC GATCTGACCG AACTTCTCTT GCCCCAGATT 
TGTGCCACCG GACGAATTCG GTTTACAGAT CCTGAAGAGC GGATGACCGA GCCATTGGTC 
TGGGATGGCG GAGAACCTTG GGAGTTATGC CTGGCTCTGG AATTTGATCA GGGGCAGGAT 
CTTTGGAAGC TGCGAGGGTT TTTGCGCCGC GGGGAAGAAT CTCGCGGGCT GGAAACCGCA 
CAGATGCTCA CACCCGGTGG GCTGGTGATC CTCGATCATC ACATCTCGCT GTTCAACGAT 
TTTGGTGCCT ATGCCTGGGT GAAGCTCTTA AAATCTGGCC AGCCTCTGGA GGTTCCCGCG 
GGTGAAGAGC ACGATCTCGT CGATCGCCTT CATGATATGC CGGCACTACC CCGGCTGGAG 
CTTCCCGACG AATTGAAACT TGAGGAAGTG CGGCTCTCGC CTCAGCCATT GCTCCTGGTT 
CACTCACCAG GCAAAAGTAA ATGGCATCAT GAACGGTTGA AAGCTGACGT GATCTTTGAA 
TACGAAGACG CCACTGTTCG TGGGTCGAGT GTTCAATGGG CGATTGTTCA AAGATCTGCC 
AGACGATACG TCGTGCGAGA TCGCGATCTG GAAGATACCT ACTGGTCGGC ACTTCAGGAT 
GTCGGTGTGC GCCGTTTGAT CGATGCCCGC CGCGGGCCCC ACGACGTGGA AATCACCGCC 
CGCGATCTGG GCCCGGCTGT TCGTAAGCTG ATCGGTCAAG GCTGGGAAGT TCGCGCTGAC 
GGCAAACAGG TCCGCCAGCC TGGTGAACTC AAATTCCAGG TGAAATCGGG CATTGACTGG 
TTTGAACTGC ACGCCGATAT CGATTTTGGT GGCAGTCGAG TCTCATTCCC TGAGTTGCTC 
TCGGCATTGG CGCGAGGTGA CAGCACGGTC TATCTCGACG ATGGTTCACT CGGAATTCTT 
CCGGAAGAGT GGGTGCATCG CTACGGACTG ATGGGTGGCC TTGGTGTTCT GGAAGGCGAT 
CATCTGAAGT TTGGTGCAGC GCAGGTCGGT CTGCTCGATG CGTTGTTGCT GGATCAGGGA 
AGTGTCGATT ACGACGCCAA ATTCGCTCAG GTGCGCGAGC GACTGGCAAA CTTTAATGGA 
GTTCAAGCCG CCCGTAAGCC TCAAGGTTTT CAAGGGGAGT TGCGAGGTTA TCAGTTAGAG 
GGTGTGGGCT GGCTGCAGTT TCTCGATGAA TTCCAGTTCG GTGGCTGTCT GGCCGACGAC 
ATGGGTCTGG GGAAAACCAT CCAAATGCTC GCATTTCTGG AAGAGCGGCG CCAGGGCATT 
CCAGCGAAGA ATCGCCTCCC CTCACTGGTG GTGGTTCCTA AATCGCTGAT GTTCAACTGG 
AAGCAGGAAG CCGAGCGATT TACTCCTCAA CTTAAAGTTC TCGAATACTC AGGTCTTGAC 
CGGGCTAAAC AACGAGAAGC GTTCACCAAG TCAGATCTGG TGCTGGCGAC TTACGGAACG 
TTACGCCGGG ATATTCACAT CCTGAAAGAT GTTGATTTCG ACTACGTGAT TCTCGATGAA 
GCCCAGGCGA TTAAAAACAA CACGTCTCAA GTGGCCAAAG CGACTCGATT GTTAAAGTCT 
GTCCGCCGAG TCGCGTTGAG CGGTACACCG ATCGAGAATC ATCTCGGTGA TTTGTGTTCG 
ATCTTCGATT TTCTCAATCC CGGTATGCTT GGAAGAAGCA GTCTTTTCAA ACTGCATGCT 
GCAGACCCGA ATGATCGAGA AACCCGTAAG GTGCTGGCCC ATGGTTTGAG GCCCTTTATT 
CTGCGCCGCA CAAAACAGGC GGTCGCTAAT GAACTGCCCG ATAAAATCGA ACAGACGATC 
TATTGTGAAA TGGGCGAAGA ACAGCAGCGT CTCTATGACG AACTGCGCGA TCACTTCCGT 
GATTCTCTAC TGGGTTTGAT TGAATCTCAG GGTTTGGCAA AGACCAAAAT GCACGTGCTC 
GAAGCTTTGC TTCGATTGCG ACAGGCCTCG TGCCACCCCG CATTGTTGCA TAAATCTTCT 
GACGAAGAAG GGAGTGCCAA GCTCGATGTG TTGATCCCCC ATCTTGAAGA ACTGGTTGGA 
GAAGGGCATA AGACGCTGGT CTTCTCGCAA TTCACCAGCA TGCTGGCGAT TGTTCGCAAG 
CATCTGGATC GGGCCGGTAT TACTTACGAA TACCTCGATG GCCAGACACG CGACCGCAAG 
GAGTGTGTCG AGAGATTCCA GAACGACAAA GATTGTGGCG TCTTCCTCAT CAGCCTGAAG 
GCGGGTGGGC TGGGTCTGAA TCTCACCGCA GCCGACTATG TGTTTATTCT TGATCCGTGG 
TGGAACCCTG CGGTGGAAAC TCAGGCCATT GATCGTGCCC ATCGTGTCGG TCAGACCCGG 
CAGGTCTTTG CCTATCGGCT CATCTGCAAA AATACCGTTG AAGAAAAAAT TGCTGAACTG 
CAGAAGCAGA AACGCGAACT GGCGGATGCG ATCCTTGAAC AGGACAACTC CGTCATGACC 
AATCTGACGG CTGATGATCT GCGGATGCTC CTCTCCTGA 

 

Protein sequence

MTLSDLLESK FRGDIRFRGA AYIQAERVAI NRITEDQIFG AVRDGVEFVT QLMRDEGQLK 
MSCTCMAGKP NPTGQASCKH VWATILLAEK QGVISSGVKP GFIPAFITED EPLDLPDEDW 
LDDELEATPS RKLSLSKSTA VAERPTPVSA PAREWETRLK ELRTAMQDGT GSYAVSAPGK 
EREVVYEVDP AASEEAECLI LQTSQRQRRA SGQWGKLKPL KLRPGRLEEI EDEEDRRILA 
HLVGGTPDRS STTGMIGEMQ AAAWRYRVPH DLTELLLPQI CATGRIRFTD PEERMTEPLV 
WDGGEPWELC LALEFDQGQD LWKLRGFLRR GEESRGLETA QMLTPGGLVI LDHHISLFND 
FGAYAWVKLL KSGQPLEVPA GEEHDLVDRL HDMPALPRLE LPDELKLEEV RLSPQPLLLV 
HSPGKSKWHH ERLKADVIFE YEDATVRGSS VQWAIVQRSA RRYVVRDRDL EDTYWSALQD 
VGVRRLIDAR RGPHDVEITA RDLGPAVRKL IGQGWEVRAD GKQVRQPGEL KFQVKSGIDW 
FELHADIDFG GSRVSFPELL SALARGDSTV YLDDGSLGIL PEEWVHRYGL MGGLGVLEGD 
HLKFGAAQVG LLDALLLDQG SVDYDAKFAQ VRERLANFNG VQAARKPQGF QGELRGYQLE 
GVGWLQFLDE FQFGGCLADD MGLGKTIQML AFLEERRQGI PAKNRLPSLV VVPKSLMFNW 
KQEAERFTPQ LKVLEYSGLD RAKQREAFTK SDLVLATYGT LRRDIHILKD VDFDYVILDE 
AQAIKNNTSQ VAKATRLLKS VRRVALSGTP IENHLGDLCS IFDFLNPGML GRSSLFKLHA 
ADPNDRETRK VLAHGLRPFI LRRTKQAVAN ELPDKIEQTI YCEMGEEQQR LYDELRDHFR 
DSLLGLIESQ GLAKTKMHVL EALLRLRQAS CHPALLHKSS DEEGSAKLDV LIPHLEELVG 
EGHKTLVFSQ FTSMLAIVRK HLDRAGITYE YLDGQTRDRK ECVERFQNDK DCGVFLISLK 
AGGLGLNLTA ADYVFILDPW WNPAVETQAI DRAHRVGQTR QVFAYRLICK NTVEEKIAEL 
QKQKRELADA ILEQDNSVMT NLTADDLRML LS