Gene Plim_2302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2302 
Symbol 
ID9139007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2973977 
End bp2975248 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003630327 
Protein GI296122549 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.113166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCTGG CTGTAGATCA CGTCAATCAG GTTGAAGCAC TCATGTTGAT CGTGCTTCTC 
CAGTTGGTTG TCATGATTGC AGCGGCCAGG TTGGGGGGGT GGCTTTTTCG AAAAGTCGGG
CAACCAACAG TCGTGGGTGA AATTGGTGCC GGGCTGATTC TGGGGCCTTC CGTCGTGGGC
AGACTCTTTC CCGACTTCAT CCCGACATTC TTCCCGGCCA GCGTCACTCC CATATTTCAG
ACACTGGGGC AGTTGGGCCT TATTTTTCTG ATGTTTCTGA TCGGTATGGA GTTTGACTTC
AGCCACCTGA AAAAAATGGG CCGAACAGCC GGCATGATTG GTGTGGCCGG GATTGTGCTT
CCATTTGCTG GAGGACTTGC TTTAGGTCTC TGGATGCATC CCTACGTTGC GATCGATGTG
CCGCTCCTGG GTTTTGCACT CTTCATGGCG ACCGCCTGCT CTGTGACAGC TATTCCTATT
CTGGGCCGGA TTATGATTGA GTTCGGCATC AATCGCTCTC GACTGGGAGC ACTCACGATC
AGTGCCGCCG CCATGGTCGA TGCTTTGATC TGGATCATGC TGGCCACAGT GGCAGCGATC
GTTCGCGGAA ATCTCCAGTG GAGTTCGGTG CTCGGCATGC TTCTGCTGAC TTTGGCCCTC
GTCGCCATGG TGATCATTGT CGTCAGGCCA CTACTGATCC GCTGGATCGA AAAGCTGCTT
CCGACTGCAG AATCCCGGCT GAATGTGACT TCACTGGCTC TGTGGATTCT GTTGATTTTT
ACGATGGCCA TGATCACCAA CTGGATCGGC ATCTTTTCGA TTATTGGGCC TTTTCTGCTG
GGTGCTGTGC TGCACGACCA GCATCGATTT CGCGAAGCCT TTGCCAGCAA AACACAGGAT
TTTGTCTACA GCCTGCTGTT GCCTGTTTTC TTCACTTATA CAGGGTTGAA GACCGATATC
GGGACTCTCG ATACGCCCTT ACTTTGGATA ATGTGTGGCC TCGTCTGCCT CGTCGCGATC
AGTGGCAAAA TCGTCGGCTG CGGCCTGGCG GCTCGCCTTG GTGGCTTATC CTGGCCCGAA
AGCGGGTGTG TGGCCATCAT GATGAACACG CGAGCTTTGA TGGGGTTGAT TGCCATTAAT
GTGGGCCGTG AGATGGGAGT TATCCCCCCC AGCGTCTTCT GCATGCTGAT CATTATGGCG
GTCGTCACGA CCTTTATGAC CAGCCCGATT CTGCGACGAC TGCTCCCACA TGTGGATACG
AGCGTCGCTT GA
 
Protein sequence
MVLAVDHVNQ VEALMLIVLL QLVVMIAAAR LGGWLFRKVG QPTVVGEIGA GLILGPSVVG 
RLFPDFIPTF FPASVTPIFQ TLGQLGLIFL MFLIGMEFDF SHLKKMGRTA GMIGVAGIVL
PFAGGLALGL WMHPYVAIDV PLLGFALFMA TACSVTAIPI LGRIMIEFGI NRSRLGALTI
SAAAMVDALI WIMLATVAAI VRGNLQWSSV LGMLLLTLAL VAMVIIVVRP LLIRWIEKLL
PTAESRLNVT SLALWILLIF TMAMITNWIG IFSIIGPFLL GAVLHDQHRF REAFASKTQD
FVYSLLLPVF FTYTGLKTDI GTLDTPLLWI MCGLVCLVAI SGKIVGCGLA ARLGGLSWPE
SGCVAIMMNT RALMGLIAIN VGREMGVIPP SVFCMLIIMA VVTTFMTSPI LRRLLPHVDT
SVA