Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2266 |
Symbol | |
ID | 9138971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2924120 |
End bp | 2926414 |
Gene Length | 2295 bp |
Protein Length | 764 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Serine/threonine protein kinase-related protein |
Protein accession | YP_003630291 |
Protein GI | 296122513 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.932872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGAATC AATCAGAAGG AACTTCAGCG CCTCGATCAG ATTCGACGAC CGCACCGTCT GACGAGAATC ACTTGAGCAA AACTTCCGCG CTACCTGTTA ACGAGGAGGA GTTGGGTGAG ACTCTTGTAC AGAATTCAGA ACTGCTTCAG AAAAGCTGCT GGTTGAGTGA ACAACTCATC GATGCTCAGG CGTTGATCGC TCCTGCTGCA GTACCGGGTT TTCGGATTCT CGAAAAGCTC GGAGAAGGGA AGTTCGGCTC GGTCTGGCTG GCCAGAGAGA CCAATACAGG CAAGCAAGTC GCCATCAAGT TCTACACCAA TCGCCGAAAC ATCGATTGGG CACTTCTCTC GCGGGAAGTG GAAAAGCTGG CGGTTCTCTA CACCTCCCGG CAGATTGTCG GATTGCTGGA AGTCGGGTGG GATTATGATC CGCCTTACTA TGTGATGGAG TATTTGCCAA ACGGCTCATT GGCCATGTTG CTGGAAGAGG GGCCACTCCG TCCGGCAGAA GCCGTTCACA TGGCGAAGCA GATTGCCAGG GGGCTCGTGC ATGCTCACGG CAGTGGAATT CTGCATTGCG ATCTGAAGCC CGCCAATATT CTGCTCGATC AGGATCTCGA ACCAAGACTT TGCGATTTTG GACAATCGCG ACTGGTCGAA GAACAAAGCC ATGCCCTGGG GACACTCTTC TACATGGCTC CCGAGCAGGC AGATCTCAAG GCCATTCCTG ATGCACGTTG GGATGTCTAC GCCCTGGGTG CGATGTTTTA TCACATGCTG GTTGGTGAGC CCCCTTATCG GTCAGACGAA TTTGAGAGCT TGCTCAAGCA ACAAACGTCA CTTGAGGGAC GGCTGGCAGC ATACCGGCAA TTTGTAAGGG AACATCCAGC ACCCAATCGA CATCGGACAG TTCCGGGTGT TGATCGCCAA TTGGCCGACA TCATCGATCG ATCTCTGGCC ATTGATCCCG CACGTCGATT TCCAAACGCT CAGGCATTCC TTGATCAACT CCAGATCCGA GAGACGCAAC GCTCTCGACG ACCTTTATTT CTATTAGGGA TTTTGCTGCC AGTCATTCTC TTGCTGTGCA TGGCACCTTT GGCAGTTGAG GCCATTCGGG TCTCTGTCAC CACAGCCCGT GTGAGACTGA CCGATCGGGC ACTGGAAAGT GATGTGGTTT CCGCGAATTT GCTCTCCCGT TCGATCGAAC GGGAGATCCT GGATCGTTTT GATGAACTGC TGCGAATTGC CCAGTATCCA CGGGTCCAAA GAACAGTGGC GATGCTGGCT GATATGCCAC CCGCTGAGAG AGGTGAGCTC AATGAATTAA TGACATCACT GAAAATGGAA GTTGATGATC GTCATCGGGC GGAAGGGCGC CAGTTGGACG ATAGCTGGTT TCTGCAGAAT ACCACAGGAG TTCAGATCTG GAGGGAACCG GCCAGCGACG TCAGCCTCGA TGAAAACTTC GCTCATCGAG ATTATTTTCA CGGTCTGGGC GAAGAGTTTT CTCCCGGGCA ACTACCGGAT GATCTTCAGC CAATCTCGAA ACCCCATCTT TCGATGGTCT ACACCAGTGC TACGACTGGC CGGTACAAAG TCGCACTCTC AGTGCCGATC TTCGATTATG ACAAGCCCGA TCAAGTGATT GGCGTGCTCG CCCGCTCGAT TTATCTGGGA GAGTTACTCG TTGAATACGA TGATCTCTTG CGGGATCAGT ACGCCAATGG TGTCAGTCGA GTGATTGCAC TGGTCGATCA TCGCGAATGG AAATTGCTGG CTCACCCGTG GATGGATGAT GAGCATCTGT CGAAACTGAC ACTCCAGCAG TTTTTATCGC TCTCGCTCGA TCCGGATGCG AGAAATCGGC TTCAATCATT ACTCAAACTT AATCCCGGCT CGATTGAAGC AGCTCAGTTT GATCGAACAC AGGATTATGT CGATCCTGTT TCTCAGTTTG ATCCCGAGCA GTATGGCGGT GACTGGCTGG CAGCCTTCAG TCCCGTCGCC AGCACGAACT GGATCGCCGT TGTTCAGGAA CGAAAAACCG ATGTGAATGC TCCTGTTGAG GAAATGCGTA CGCGATTGTT TCAACTGGCT TACTGGGGAG TGGTGCTGGT TTTCGGAATC GTCGTGACCA CCTGGTTGAC TCTCATCATG GCGCTATCCG AAAGACCGGC CAAACGCCGC CGATTATCAA AGTTCGGGTT GTCTGGACTG AGTTTCCACT CATCGAACTC TTTAACGTCT GAAAGTTCAA AAGATGCGAA ATCATCCGGG CCTGTCTCAG GATGA
|
Protein sequence | MSNQSEGTSA PRSDSTTAPS DENHLSKTSA LPVNEEELGE TLVQNSELLQ KSCWLSEQLI DAQALIAPAA VPGFRILEKL GEGKFGSVWL ARETNTGKQV AIKFYTNRRN IDWALLSREV EKLAVLYTSR QIVGLLEVGW DYDPPYYVME YLPNGSLAML LEEGPLRPAE AVHMAKQIAR GLVHAHGSGI LHCDLKPANI LLDQDLEPRL CDFGQSRLVE EQSHALGTLF YMAPEQADLK AIPDARWDVY ALGAMFYHML VGEPPYRSDE FESLLKQQTS LEGRLAAYRQ FVREHPAPNR HRTVPGVDRQ LADIIDRSLA IDPARRFPNA QAFLDQLQIR ETQRSRRPLF LLGILLPVIL LLCMAPLAVE AIRVSVTTAR VRLTDRALES DVVSANLLSR SIEREILDRF DELLRIAQYP RVQRTVAMLA DMPPAERGEL NELMTSLKME VDDRHRAEGR QLDDSWFLQN TTGVQIWREP ASDVSLDENF AHRDYFHGLG EEFSPGQLPD DLQPISKPHL SMVYTSATTG RYKVALSVPI FDYDKPDQVI GVLARSIYLG ELLVEYDDLL RDQYANGVSR VIALVDHREW KLLAHPWMDD EHLSKLTLQQ FLSLSLDPDA RNRLQSLLKL NPGSIEAAQF DRTQDYVDPV SQFDPEQYGG DWLAAFSPVA STNWIAVVQE RKTDVNAPVE EMRTRLFQLA YWGVVLVFGI VVTTWLTLIM ALSERPAKRR RLSKFGLSGL SFHSSNSLTS ESSKDAKSSG PVSG
|
| |