| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2238 |
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| Symbol | |
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| ID | 9138943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2886277 |
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| End bp | 2888865 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003630263 |
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| Protein GI | 296122485 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCTA ACCAGCGAGT CAGCACGCTG CTCACATACA CGCTTGCAGC GTTATCGAGC
ATGACTTTTG AGGTTGTGCT TGGTGAACCC GAGCGGGCGA TCTGGCTTTC ATGCGTCATC
GGGATTAGTA AAGTTGTTCT GGCATTGTTG GCTGGATGGC TGCTGAAATT CAGTTTGCCA
ACTTATTTTA CCAGGCCAGA AGGGCAGGAT CACTCACTCC CCATCATCAG CGGGTTGGTC
GTGGCCCTAT TGGGTATCGA ACTCATTACG CGGGCACAAC TGGGGCTTTG GCTACCTCTG
GAACTGCTTC TGCTCCTGGC GTTGCAAGCC GTCATGCTGG CACTGGTCAT CATCAGTGGC
TGGGGGAACT ATCACGGCAT GGTCGCGGTG ATGTCGACAT TTTTGATTCT TTTTTCGGCA
GCACTTGGCA AGCCCTGGTG GTTGCAGATT CTCGTACTGG GATATCTGGC TGCCGGGATC
TGGTGGCTGA TGGGAAAACA TTGGGAGAGT CTGCATTCCC ATCTGATCTC GTCCAGTTCC
AGGAGGTTTC CGCGCAGCTG GTTATTGATT GTGCCTGTGC TCTTGGGATT GACGATGCTC
GCCATTCCGC TGGGTTATGC GGGTGTGACA GGCTCGCTGT CGGGGTTTAT GCCCAGTTCA
GGTGGAAATG GAGACTCAAG CCCCTGGGCG CGAGGGGGTG TCAATGATGG CGACACCGTG
ATTGCGGGAA CGGAGAACGT CAAAAGTTTT GCCCCGATTG ATGACGCACC GTTCATGACA
TCTCATGACC CGAGTCTGTA CGACCTCTTT GATGATTCCT ATAACGAACC CATCATTCCC
AAAAATCAGG ATCGAGCTAT CGCTCTGCCT CGACAGTTTC GATCAACTGC CGAGCAGAAA
ATGGCCAAGG CTCAGACGGG TGGCCGTCCT TTTTCCATGT TGAGAAAATC AGAGACGGAA
AATAAGACTC TTCCCACCAA TATCTCGACG GACGCCGTAG CATTTTTGGT CGGGCGAGTC
CCACTGCATC TGTCACTGCA GACTTTTGCA GAGTTTGATG GTGTGGTCTG GCAGGCCGAG
GCTGAGCCCT CGATCGCATC GATGCAGGGA ACAATCCAGA CGATCCAGGG GAAGCCCTGG
TTTGTCCTTC CGGCGGAAAC TCGCCCAATG GGGTTTGGCC AGAGTGAACT GCATGCCATC
AAGCTTGTGC AGCTCGATAC CAATGCGATT CCATCGCCAC CCGGTCTTGA AGCCGTGATG
ATTGATCAGT TAACGGATGC CACTTTTTAC AAGTGGGCAG CCCCCGGCCG ATTACGGCTT
GATCGCGAGA GATTGCCTGA CCTGACGGTC ATCCATCTTC AATCAGCACC TGTGGCAGAG
AAATCATTGC GATCGAGTCC GACGAACTTT CCAAGCGGTG CCATGCAATA TCTGGGAATG
CCTGATGATG ATCATCTTCT GCGTTTCGAA GAGTTAGCGG AGCAGATAAC CAAGCCCTAT
CCTCGTGGCT GGTCTCAGAT TGCCGCTATT CGAGATTACG TGCGTTCTCA TTACCAGCTT
GATCGAGAAA TTCGCCCCCC TGTCGATTGT GAGAATGTCC CTGCCTGGTT TCTGTTCGAT
TCCAAAAGAG GAAGCGATTA TCACTTTGCC GCAGCGACAG CGATGCTCCT GCGAGCTGCT
GGTTATCCCT CCCGGTTAGT CACAGGCCTG TATGCCCGGG ATGATCGATA CGATTATCGA
TTGAGGCATA CAGCGATTCT CAAAGAGGAT GTGCATACTT GGGTCGAGAT TCATGCAGGT
CTCAACTGGT GGGTCACCGT CGAGCCCACT CCCGGCTACA AAGTCTTGCA GCCGGTTCCC
ACCATCTCCG AATCGATCAT GTTGGCGATC TGGTGGTTGT CGCGGACCAT CTGGCAGAAT
TTTTTCATTC TGTTGGCGTG CTTCGTGATG ACTTCTGTCG CATTCTGGCA GCGCCATCAT
CTGCTGGCGG AATGGAAGGC GTACAGGTGG CGGAAATCTT GCCATCGACT GAATCGAGAA
GCTCTTCTGG AGGCCGGGAA AGTCCTATCG TTGAGACTCA AAGCCGCATC GTGGGATAAG
CCAGATTCCT GCACTCTGGG ACGCTGGCTT CAACAGATCC GGCGAAGCCT GAAGACCGCA
GTTTCAAGAA TCGATGGCCT CGAATCAGCA TGTGCCATGG ATGAATCACT GACGAAAACA
CGTGAAAAAA TGCGGATGCT GGCTCCGTCG TGTCTGGAGT TATCGCGATT ATTCGAGTGT
TTTGCAGAAT TGCACGATGC GGCTCTTTAT GGCCCTGAGG CGTATTTCGA GAGGCTTCCA
TTCGCTGAAG CTCAATCACT ACTGGCCCGG CTGAAGCAAA TGGATGGCGA TTGGAGCAGT
TGGAGACTCA AACGCGTGCT CAAGGTTCTG GCTCAGGAAT CTGAGCGAAG TCAGGCATTG
AGCGAAGCCA AAAATCAGCC AGGTGAATTC ACGGAAGTTT CATCCTCAGG TGTGGTGATT
TCGGCAGATA CTCGAAAAGC AGCCGCCAGA TTCAGACTGA ATCAGGATCA GCTCATTGTC
AGTGCTTAA
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| Protein sequence | MPANQRVSTL LTYTLAALSS MTFEVVLGEP ERAIWLSCVI GISKVVLALL AGWLLKFSLP
TYFTRPEGQD HSLPIISGLV VALLGIELIT RAQLGLWLPL ELLLLLALQA VMLALVIISG
WGNYHGMVAV MSTFLILFSA ALGKPWWLQI LVLGYLAAGI WWLMGKHWES LHSHLISSSS
RRFPRSWLLI VPVLLGLTML AIPLGYAGVT GSLSGFMPSS GGNGDSSPWA RGGVNDGDTV
IAGTENVKSF APIDDAPFMT SHDPSLYDLF DDSYNEPIIP KNQDRAIALP RQFRSTAEQK
MAKAQTGGRP FSMLRKSETE NKTLPTNIST DAVAFLVGRV PLHLSLQTFA EFDGVVWQAE
AEPSIASMQG TIQTIQGKPW FVLPAETRPM GFGQSELHAI KLVQLDTNAI PSPPGLEAVM
IDQLTDATFY KWAAPGRLRL DRERLPDLTV IHLQSAPVAE KSLRSSPTNF PSGAMQYLGM
PDDDHLLRFE ELAEQITKPY PRGWSQIAAI RDYVRSHYQL DREIRPPVDC ENVPAWFLFD
SKRGSDYHFA AATAMLLRAA GYPSRLVTGL YARDDRYDYR LRHTAILKED VHTWVEIHAG
LNWWVTVEPT PGYKVLQPVP TISESIMLAI WWLSRTIWQN FFILLACFVM TSVAFWQRHH
LLAEWKAYRW RKSCHRLNRE ALLEAGKVLS LRLKAASWDK PDSCTLGRWL QQIRRSLKTA
VSRIDGLESA CAMDESLTKT REKMRMLAPS CLELSRLFEC FAELHDAALY GPEAYFERLP
FAEAQSLLAR LKQMDGDWSS WRLKRVLKVL AQESERSQAL SEAKNQPGEF TEVSSSGVVI
SADTRKAAAR FRLNQDQLIV SA
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