Gene Plim_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2142 
Symbol 
ID9138845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2765410 
End bp2765700 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content49% 
IMG OID 
Producthelix-turn-helix domain protein 
Protein accessionYP_003630168 
Protein GI296122390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAT CTGAACTTCC TGAGGTGTTT CAAGAGAATT TAAGGGCTGC ACGCCTTCGT 
TCAGGCCTTA GTCAAAGACG GTTAGCAATG CTTGTCGAAT GCTCTCCCAA CTCAATTGTT
GAGTGGGAGA CTGGCAAAGC ATCACCCAGC CTCAACTCGG TACATCGACT GGGGAAGGCG
CTCGGAATTA GTTCAGAGCT GTTGCTCGTG AAGTTCTGTA GCGAACCAGT TCAGTTGAAG
CCCCAGCAAA ACCAAAGTTC GTCCGGAAAG AGTGAAAAGA TTCCTGCCTA G
 
Protein sequence
MKPSELPEVF QENLRAARLR SGLSQRRLAM LVECSPNSIV EWETGKASPS LNSVHRLGKA 
LGISSELLLV KFCSEPVQLK PQQNQSSSGK SEKIPA