| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2017 |
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| Symbol | |
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| ID | 9138720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2615718 |
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| End bp | 2617358 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | YmdA/YtgF protein |
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| Protein accession | YP_003630044 |
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| Protein GI | 296122266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.855551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTGTCT TTGGTTCCCT TCAGACAGAT CTGATTCGTT TCTCCGCCTT TTTCATTCAA
GAATTCATTT GTCAGCCGAC AAAATTTAAG GGCTGCCAAG TGGAAATAGT CATTGCAGGC
ATTCTCGGGT TGCTACTCGG AGCAGCAGCG GGATACTTCG CTGAACGAGT TGTTCGTGGT
ACTGCGTTCA AAACCCGTGC AGAGATCGTC GCTCAGGCCG AGCGTGACGC CGAGAACTTG
CGAAAAGCTG CCGAGCTCTC TGCCAAAGAA GAACTTCTTA AGCGTCGAGA AGAACTTGAC
CGTGAGCTTT CAGCACAGCG AGATGAACTT CGACAGCTGG AGCGGGCTTT GGATAAAAAA
GAAGCCACGA TTCGCGAGCG CCAGGACGAG TTCGCCAAGC GAGAAAGAAT GCTGGAGACC
ACTCAAACCA AGTTGGCAGA ACGCGCCAAA GTGGTGGAAG CTCGTGATCG AGAAGTCGAA
AAAATTCTCA AGCAGGAGCA GGAACAACTC TACAAGATCA GCGGCCTGGA TCGCGAATCT
GCCGTCCGAA TGCTCCTGGA TCAGCTCGAA CGTGAACTCA AGAACGAAAC TGGCGCTCTC
GTAATGAAAC ACGAGGCCGA AGTGAAAGCC CAGAGCGAAA AGCAGGCTCG GGAGATCATT
GGTATGGCCA TTCAGAGGTA CGCCTCAGCC CATACTTCCG AATCAACGGT TTCCACAATT
GACATCCCGA ATGATGAAAT GAAGGGGCGA ATCATTGGTC GCGAAGGCCG CAATATTCGC
GCCTTTGAGA AGGCCACCGG AGTCGATGTG ATTGTTGATG ACACACCGGG TGTGGTCGTT
GTTTCAGCTT TTGACAGTGT TCGCCGGGAA ACAGCCAAGC TCGCACTGAT TAAACTGATT
CAAGATGGTC GCATGCACCC CACGCGCATC GACGAAATCG TGCTCGAAAC TCAGAAGGAA
ATGGAAGAAT ATATTCTTCG CCAGGGAGCT GAGGCTGCAC AGGAAGCCAC GATTCCTAAC
CTCCACGAGA AACTGCTCGC ACTCATGGGG CGACTTCACT TCCGTACCAG CTACAGCCAG
AACGTACTGC GGCATTCGAT TGAAGTTTCT GCACTCACAG GCATGATGGC AGAGCAACTG
GGGCTGGACG GCAATCTCGC CCGCCGCTGC GGCTTCCTGC ATGATATTGG AAAGGCCGCC
GACCATGAAA TGGAAGGTGG TCACCCGGCT GTGGGTGCCG AATTGCTCAA GCGGTATGGC
GAACGTCCCG AGGTGATCCA TGCCGCACGC GGCCATCACG ACGATATTCG TCCTGATTAC
ATCTACACAG TTCTGGTGGC GGCTGCCGAT GCCTGTTCGG CTTCTCGACC TGGTGCACGC
CGCGAGTCGC TTGAGCGATA CGTCAAACGT CTGGAAGAAC TGGAATCGAT TGCCTGTGGA
TTTCCAGGTG TCGAACAGGC TTATGCAGTT CAGGCGGGCC GGGAAATCCG CGTCATTGTG
AATCCGCAGG ATGTGAATGA TCGCGAAGCG GCCCGTTTGT GCCGCGATCT GGCAACAGCC
ATTGAACAAT CTCTCACCTA CCCTGGGGAA GTCAAAGTCA CTGTCCTGCG TGAGACACGA
GTCATTGAAT ACGCACGCTA A
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| Protein sequence | MIVFGSLQTD LIRFSAFFIQ EFICQPTKFK GCQVEIVIAG ILGLLLGAAA GYFAERVVRG
TAFKTRAEIV AQAERDAENL RKAAELSAKE ELLKRREELD RELSAQRDEL RQLERALDKK
EATIRERQDE FAKRERMLET TQTKLAERAK VVEARDREVE KILKQEQEQL YKISGLDRES
AVRMLLDQLE RELKNETGAL VMKHEAEVKA QSEKQAREII GMAIQRYASA HTSESTVSTI
DIPNDEMKGR IIGREGRNIR AFEKATGVDV IVDDTPGVVV VSAFDSVRRE TAKLALIKLI
QDGRMHPTRI DEIVLETQKE MEEYILRQGA EAAQEATIPN LHEKLLALMG RLHFRTSYSQ
NVLRHSIEVS ALTGMMAEQL GLDGNLARRC GFLHDIGKAA DHEMEGGHPA VGAELLKRYG
ERPEVIHAAR GHHDDIRPDY IYTVLVAAAD ACSASRPGAR RESLERYVKR LEELESIACG
FPGVEQAYAV QAGREIRVIV NPQDVNDREA ARLCRDLATA IEQSLTYPGE VKVTVLRETR
VIEYAR
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