| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2004 |
|---|
| Symbol | |
|---|
| ID | 9138706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 2600670 |
|---|
| End bp | 2601782 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003630033 |
|---|
| Protein GI | 296122255 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0480626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTCC TGCTCGTTGT AGCACTGGGA ATGTGTGGTT GGGCATTATG GCAGACGACT
GAAACGGCCC AGATCATTGA AACCAGCTTC GAGACGATGC CCGCGGATCG CTCTGAAACT
CAAGCAGCCG CTCCGGCAAA AAGTGAGCGA TCCACGGCGT CGCAAGTCTC ACATGAAACA
CAGAATTCCA TCGACAAAGG AACACGCTGG CTAATGTCCG CCTTGAATCG TCGCGGTGTT
GGCCCGGATA TCGATCAACC CTTTGACCTG AGCTGCACTG CGATCACAGG TCTGGCATTG
CTTTCTCAGG GGAACACTCC ACGGGGCGGT CGGCATTCGG CTGAACTTCG GCAGATACTC
GAAATCATGC TCATGAGAAT CGATGACTTT CCACCTTCCA AAAATCGAGC GGTACAGCTT
TCTCTGGTAC AAAGAAAAAT TGGACGCCAC GCCGACCTCT TTTTTGCGGC ACTGTTTCTC
AGCCAGACTC TCGGAGAATC GAGCAGTTAC GATCGTGAGA TTCGCGAGAA ACTCGAACGA
CTGATCGATG TCATTGCCAG CAGCCAGAAA GATGACGGCA CCTGGGGTGA AGAAAGTTGG
GCCCCAATCT TAGGAACTGT CATGGGCTGG GAATCTCTCA GAGCCTCCAG TTCTTGCGGC
ATCAAAGTGC AGGCCTCGGC TGAGTTGGCA GGACAGGCTC TGCTCAAAAA GCTGCAAATT
AAAAGCCAGC AGGAAACCAA CTGGATGCAC GACTTCTACA AGACGGCCTC CACCATCCGG
GTCCTGCATT CCACGAAGCA TCGACATGAG GCGGCGTACA TCGAATGCGT CCGTCAGATG
ATTGAGATCG CCAAAATGGA TGATCGACCT TTTCTCCACG CAGGTGGCGA AGAATACCTG
GCGTTTTACT TGATGACAGA ATGCCTGCTT CAAGAACAAC GCGAAGACTG GCAACAATGG
TACCCACTCG TCTGCAATCG ATTGGTTAAA CATCAGAACC GGGACGGAAG CTGGACCGGA
CACCATTGCA TTACGTCCCG CACCTTCTGC ACAGCCGCTG CACTTCTTAC ACTGCAAGCC
CCCCGGCGAT CGCTCCCCAT GTCCGATCTC TAG
|
|---|
| Protein sequence | MRLLLVVALG MCGWALWQTT ETAQIIETSF ETMPADRSET QAAAPAKSER STASQVSHET
QNSIDKGTRW LMSALNRRGV GPDIDQPFDL SCTAITGLAL LSQGNTPRGG RHSAELRQIL
EIMLMRIDDF PPSKNRAVQL SLVQRKIGRH ADLFFAALFL SQTLGESSSY DREIREKLER
LIDVIASSQK DDGTWGEESW APILGTVMGW ESLRASSSCG IKVQASAELA GQALLKKLQI
KSQQETNWMH DFYKTASTIR VLHSTKHRHE AAYIECVRQM IEIAKMDDRP FLHAGGEEYL
AFYLMTECLL QEQREDWQQW YPLVCNRLVK HQNRDGSWTG HHCITSRTFC TAAALLTLQA
PRRSLPMSDL
|
|---|
| |