Gene Plim_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2003 
Symbol 
ID9138705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2599173 
End bp2600498 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003630032 
Protein GI296122254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0341062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGC ATCCTTGGAA TATCCTTGTT TCAATCTTGG CATGGCGTAA GGTCTTGCAG 
CGCCCTGCTA TAATATGTGT CATCTGGTTG TTACATTTTG TGACGGGTTG TGATTCCCAG
CCCAAAGAGG ATTTACCCAC CACCAGCGAT AGAAGTTTCC GGACTGTTTC GGAGGTGGCA
GCAAAGCCAA CCAAAGCTTC AAGTGATTCT GTACCAGACC AAAGGTATGA GCGCTGTCTG
AAGGCATGGA AACATGGCGT TCGATGGTTA TTAAATCAGC AGCAGGCCGA CGGCGGGTGG
CACTCTGAGG TCTATGGAGT TATGCAGGGA GGAGTTGGTC AGACGGCACT AACACTCGAT
TTGCTGACTC GAAGTGAAGG TGTCGAAGGA GTGATTCCTC CGATCGCCAT TCGGCGGGGG
ATTGACTTTC TCACCAAGCA TGTTGATGAA ATGGGATTGG TTCAGGGTCC CGGCCGGGCG
GCTGATTATC CGGTTCATGC CACTGCACTA TTGCTTCGGG CATTAAGCCG AACCCATGCC
GTGGAAAATT CTGATCTGAG CCGTCAATTG ACAGCGGCAC TCCAGGCCTC ACAACGGATT
GAGGCCCAGG GCTGGATCCA AAGCGATCCG GATTTTGGGG GGTGGGGGGC ACTCAATGAC
CGTGCTCCAC AGATAGACAC AACTTCGGAA CGATCTCATC GCGAAGGGAG TCCATCCAAT
ACTTCTGTGA CCCGCATGGT GCTGATGGCG CTGGCTGCAG CCGATGGCCT GACAACGGAC
ATCACACGGG ATGCCGAGAC GTTTCTTGGT AGATGCCGGG TGAATGATCC CTTGCAGAGG
GGAGTGACGG TGTATTTCTT TACCCCTGAT CCCATAAATA CACTGAATAA GCGAGGTTTT
GAAATCAGTG CTGACCAGCT TCCCCAGGCC AGACCTTATC CTACAGCGAC CTGGGACGGG
TTAATGGCCA GAAAGATCTG TTTGCAAAAG CAGTTCCCTG AGCTTCATCG ACCGACTGTC
GAACCCGGCT GTGCGAAGCC ACTCCCCTTC TCTACGGTCA ACGAGGGCGA GTCATTCAAA
AGTCCCGATG GGGATGCAGG TCTGGATTAC TACGAAGCAT CGCAGTGGGC TGAATTGAGA
GTGGTCATTC CATCAATCAT CGACTCCGCT GAGTGGGACG AGTTAATCCG GCGGGTTCTT
GATCGACAGC GCGCTGATGG TCGATGGGAA AATGATCAAC GTGAAATGCG GGAAGACGAC
CCGTTAATTG CCACACCTTT TGCGCTCATG GCACTGGGGC AATGGCTGAG CGAACACCAT
CAATAA
 
Protein sequence
MTRHPWNILV SILAWRKVLQ RPAIICVIWL LHFVTGCDSQ PKEDLPTTSD RSFRTVSEVA 
AKPTKASSDS VPDQRYERCL KAWKHGVRWL LNQQQADGGW HSEVYGVMQG GVGQTALTLD
LLTRSEGVEG VIPPIAIRRG IDFLTKHVDE MGLVQGPGRA ADYPVHATAL LLRALSRTHA
VENSDLSRQL TAALQASQRI EAQGWIQSDP DFGGWGALND RAPQIDTTSE RSHREGSPSN
TSVTRMVLMA LAAADGLTTD ITRDAETFLG RCRVNDPLQR GVTVYFFTPD PINTLNKRGF
EISADQLPQA RPYPTATWDG LMARKICLQK QFPELHRPTV EPGCAKPLPF STVNEGESFK
SPDGDAGLDY YEASQWAELR VVIPSIIDSA EWDELIRRVL DRQRADGRWE NDQREMREDD
PLIATPFALM ALGQWLSEHH Q