Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2003 |
Symbol | |
ID | 9138705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2599173 |
End bp | 2600498 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003630032 |
Protein GI | 296122254 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0341062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGGC ATCCTTGGAA TATCCTTGTT TCAATCTTGG CATGGCGTAA GGTCTTGCAG CGCCCTGCTA TAATATGTGT CATCTGGTTG TTACATTTTG TGACGGGTTG TGATTCCCAG CCCAAAGAGG ATTTACCCAC CACCAGCGAT AGAAGTTTCC GGACTGTTTC GGAGGTGGCA GCAAAGCCAA CCAAAGCTTC AAGTGATTCT GTACCAGACC AAAGGTATGA GCGCTGTCTG AAGGCATGGA AACATGGCGT TCGATGGTTA TTAAATCAGC AGCAGGCCGA CGGCGGGTGG CACTCTGAGG TCTATGGAGT TATGCAGGGA GGAGTTGGTC AGACGGCACT AACACTCGAT TTGCTGACTC GAAGTGAAGG TGTCGAAGGA GTGATTCCTC CGATCGCCAT TCGGCGGGGG ATTGACTTTC TCACCAAGCA TGTTGATGAA ATGGGATTGG TTCAGGGTCC CGGCCGGGCG GCTGATTATC CGGTTCATGC CACTGCACTA TTGCTTCGGG CATTAAGCCG AACCCATGCC GTGGAAAATT CTGATCTGAG CCGTCAATTG ACAGCGGCAC TCCAGGCCTC ACAACGGATT GAGGCCCAGG GCTGGATCCA AAGCGATCCG GATTTTGGGG GGTGGGGGGC ACTCAATGAC CGTGCTCCAC AGATAGACAC AACTTCGGAA CGATCTCATC GCGAAGGGAG TCCATCCAAT ACTTCTGTGA CCCGCATGGT GCTGATGGCG CTGGCTGCAG CCGATGGCCT GACAACGGAC ATCACACGGG ATGCCGAGAC GTTTCTTGGT AGATGCCGGG TGAATGATCC CTTGCAGAGG GGAGTGACGG TGTATTTCTT TACCCCTGAT CCCATAAATA CACTGAATAA GCGAGGTTTT GAAATCAGTG CTGACCAGCT TCCCCAGGCC AGACCTTATC CTACAGCGAC CTGGGACGGG TTAATGGCCA GAAAGATCTG TTTGCAAAAG CAGTTCCCTG AGCTTCATCG ACCGACTGTC GAACCCGGCT GTGCGAAGCC ACTCCCCTTC TCTACGGTCA ACGAGGGCGA GTCATTCAAA AGTCCCGATG GGGATGCAGG TCTGGATTAC TACGAAGCAT CGCAGTGGGC TGAATTGAGA GTGGTCATTC CATCAATCAT CGACTCCGCT GAGTGGGACG AGTTAATCCG GCGGGTTCTT GATCGACAGC GCGCTGATGG TCGATGGGAA AATGATCAAC GTGAAATGCG GGAAGACGAC CCGTTAATTG CCACACCTTT TGCGCTCATG GCACTGGGGC AATGGCTGAG CGAACACCAT CAATAA
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Protein sequence | MTRHPWNILV SILAWRKVLQ RPAIICVIWL LHFVTGCDSQ PKEDLPTTSD RSFRTVSEVA AKPTKASSDS VPDQRYERCL KAWKHGVRWL LNQQQADGGW HSEVYGVMQG GVGQTALTLD LLTRSEGVEG VIPPIAIRRG IDFLTKHVDE MGLVQGPGRA ADYPVHATAL LLRALSRTHA VENSDLSRQL TAALQASQRI EAQGWIQSDP DFGGWGALND RAPQIDTTSE RSHREGSPSN TSVTRMVLMA LAAADGLTTD ITRDAETFLG RCRVNDPLQR GVTVYFFTPD PINTLNKRGF EISADQLPQA RPYPTATWDG LMARKICLQK QFPELHRPTV EPGCAKPLPF STVNEGESFK SPDGDAGLDY YEASQWAELR VVIPSIIDSA EWDELIRRVL DRQRADGRWE NDQREMREDD PLIATPFALM ALGQWLSEHH Q
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