Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1938 |
Symbol | |
ID | 9138640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2524865 |
End bp | 2525383 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | protein of unknown function DUF437 |
Protein accession | YP_003629967 |
Protein GI | 296122189 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCAATT TCCCTGCAAA ACTCATATCA TTCACGCTCA ATTTCATGGA TCCGTCAGTC TGGGAGTATC TGTTGACCAG TCAGGAACAA TCACCAGATA AAGAACGCAT CGCCCTGGCA ATTCAACAGC CCTGGGCCGA ACTGATTCTT CAGGGGAAGA AAACGATTGA AATCCGCTCG ACCATGACGA ATCAGCGAGG TCGCTTCTAC GTTTATGCAT CCCGAAAGCC CTCTCAGCTT CCTTGCGCTC TGGTCGCAGC CGCTGAGCAC CATCTTGAAA TCGAACAACT CCCGAAAGGG GTGATCCTGG GGACAGTCGA ATTGATGGAT GCTCGATCAG CTAAGGCGTC TGATGCTCTT GCGGCCTGCG TCCCGCCAGA ACTTCTCGTT AACCGGCAAG CCTGGATTCT GCAGAATCCT TTCCGGCTCC CGCAGGAACT GTCACCGCGA TTTCTCCCCT ATGGCATCTG GTTCTACCCT TTCCAAAGGA AGCCGGCAGC GGGGGACTCA CTGCGATAG
|
Protein sequence | MPNFPAKLIS FTLNFMDPSV WEYLLTSQEQ SPDKERIALA IQQPWAELIL QGKKTIEIRS TMTNQRGRFY VYASRKPSQL PCALVAAAEH HLEIEQLPKG VILGTVELMD ARSAKASDAL AACVPPELLV NRQAWILQNP FRLPQELSPR FLPYGIWFYP FQRKPAAGDS LR
|
| |