| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1916 |
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| Symbol | |
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| ID | 9138618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2500865 |
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| End bp | 2501803 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | type II secretion system protein |
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| Protein accession | YP_003629945 |
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| Protein GI | 296122167 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.141806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGATTG ATTTCGCTAC GATTGTCCCG TTGGCAATCT TTGCCTCGAT CACGTTGGCT
GTGTTTGCAG CTTTGCAGAT ATTCAGCCGG GAGCAGAGTC GTGCCAGCCA GCGACTGGAT
GAGTTCAACA ATCCCTTGTT GAGAGAACAG CAGCGAGGAC AGAAAAATGG CATGTCCAAC
CTTCTTGAGA AAGCCGCACC GGCTCTGTCG AAGGCGTTGG AACCTAAGTC GGAGCTGGAA
CAAAGCCAAT TGAAAATTCG CCTGGCGAAT GCCGGCTTTC ATTCCCCTCA GGCACCCATG
ATTTATCTGG CCATCAAGAC CGTTTGCCTG GTCGTGGGCC TGGTTTTGGG TGGTGGGTTG
GGAATGTACC GCTACGGGAC AACTCAAGCC GGTTTGACGA CATTAATCAT TGCTGCTGGT
GCCGGTTTTT ATCTCCCGGA AGGTGTTCTG GCTTATCTCA TCAGTAAGCG AAAACAGGCG
ATATTTCTGC AACTGCCCGA TGTGCTGGAT CTGCTGGTCG TCTGCGTCGA GGCCGGTCTG
GGATTAGATG CCGGCTTGCG GCGTGTGGCC GAAGAATTGA AGGATACGGC GCCCGAGATT
TGCGGCGAAC TGGCGATGTG TAACCTGCAG CTACAGATGG GACGAAACCG TCGGGACATG
CTGCATGATC TGGGAGTGCG GACAGGTGTG GATGATGTGA AGGCACTCGT GGCCATCATG
ATTCAGGCCG ATAAGTTTGG TTCTTCCATC GCCCAGGCAT TACGCGTGCA GTCAGATTCC
ATGCGTGTTA AGCGGCGTCA AATTGCCGAA GAGAAGGCTC AAAAAACAGC CGTACAAATG
CTGTTTCCCA TGGTGATTTT TATTTTTCCA GGCATCTTCG TAGTGCTGGT CGGCCCTGCT
GCCATCAAGA TGATGGATCA ACTGCTGAAT AAGCCGTGA
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| Protein sequence | MMIDFATIVP LAIFASITLA VFAALQIFSR EQSRASQRLD EFNNPLLREQ QRGQKNGMSN
LLEKAAPALS KALEPKSELE QSQLKIRLAN AGFHSPQAPM IYLAIKTVCL VVGLVLGGGL
GMYRYGTTQA GLTTLIIAAG AGFYLPEGVL AYLISKRKQA IFLQLPDVLD LLVVCVEAGL
GLDAGLRRVA EELKDTAPEI CGELAMCNLQ LQMGRNRRDM LHDLGVRTGV DDVKALVAIM
IQADKFGSSI AQALRVQSDS MRVKRRQIAE EKAQKTAVQM LFPMVIFIFP GIFVVLVGPA
AIKMMDQLLN KP
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