| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1876 |
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| Symbol | |
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| ID | 9138578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2450678 |
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| End bp | 2451202 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003629905 |
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| Protein GI | 296122127 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.218234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGACGATC ACACACGACA AGCCACGCGA CTTTGGACAC TGGCACAGCC GGTCGTGTCG
GCGTTCGTCG TTTCGGCAGT GCGGGACTTT ACAGCGCGGG ACGACGTTCT GCAGGAAACA
GCCGTCGCGG TAATGGAATC TTTTGATCGC TATGATCCTC AGCGGCCATT CGTCGCCTGG
GCGATGGGGA TCGCCCAGAA TCAAGTCCGC CTGTACCTCA GACGCATTCA ACGCGATCGA
CTGGTGTTTG ACGAAGATGT ACTGGTTCAG TTAGCGGCGG CTTTTGAGGA GGCGTTTCCG
GAACAGTCGC CATCCCTCGG ATTTCTGCGG GGCTGTCTCG ATCAGCTCGA GGGTCGAGCC
CGCGAACTCT GCGAACTTCG GTATGGTCGC GATCTGAAGC CAACGGCGAT TGCCGAATCA
CTGGGTATGT CTGGCAACAC AGTCTCCAAG GCGCTTCAGC GAATACGTGA ACAGTTACGA
GCATGTATTG AGCGAAAAGT CTCCTTCGAA AAGGGAATGC CATGA
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| Protein sequence | MDDHTRQATR LWTLAQPVVS AFVVSAVRDF TARDDVLQET AVAVMESFDR YDPQRPFVAW
AMGIAQNQVR LYLRRIQRDR LVFDEDVLVQ LAAAFEEAFP EQSPSLGFLR GCLDQLEGRA
RELCELRYGR DLKPTAIAES LGMSGNTVSK ALQRIREQLR ACIERKVSFE KGMP
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