Gene Plim_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1809 
Symbol 
ID9138510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2353197 
End bp2355089 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content54% 
IMG OID 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003629838 
Protein GI296122060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.345903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTACG CAATTCGATT CGATTGTTTT CGTTTGATGA TGGTCATTGG TCTGATGATC 
CCGGCTTTTC CACAACTGCT CACCCGAGCC TTTGCAGATC AGATCGTCCC CGGGAATACA
TCCCTCTCGA ACGATACTCA GGATGCCGGG CAGTCCCAGC CCGAGAAGAT TCCTGCGATC
GTGAAAGAAG CTGAGCAGAA GCGGATTCAA ATGATCCGCG ACGTCTCACC TGCAGTTGTC
GCCATCTTTT CGAGCTCAGG CGATGGAGGT GGATCGGGCG TTTTGATTTC CCCCGACGGA
TTCGCTTTGT CGAATTTCCA CGTGACCAGT GGTGCTGGCA ACTTCATGAA GTGCGGACTC
AACGACGGAA AACTCTACGA TGCCGTCATC GTAGGAATCG ACCCGACAGG CGATGTCGCA
CTCATTCAAC TGCAAGGACG CCAGGATTTT CCCTTTGCCC GGATGGGAAA CAGTGATCTG
CTGAAACCTG GGGATGCCGT TTTCGCGATG GGAAACCCGT TTCTTCTGGC CACGGATTTC
ACTCCCACCA TCACCGCAGG GATTGTGAGC GGCCTGCATC GATACCAATA TCCTGCGGGA
ACATTTTTAG AGTACGCCGA CTGTATACAG ACCGATGCTT CCATCAACCC TGGTAACTCA
GGGGGGCCAC TGTTCAATCT GCAGGGTGAA CTGATCGGGA TTAACGGCCG GGGATCATTC
GAGAAGCGTG GCCGTGTGAA TTCAGGGGCC GGATACGCGA TTTCGATCAA TCAGATCCGG
TACTTTCTGG GCCACTTGAA GTCGGGACGA ATTGTCGATC ACGCCACTTT GGGTGCCACA
GTTCGCTCGG GATCATCACG AGAAGTCCTT GTCGATCAGG TGCTAGAAGG TTCGAGTGCC
TGGAACGCCG GTCTTCGAGA AGGTGATGAA ATTGTCACCT TTGCCGGACG CCCGATGGGA
AGTGTCAACC AGTTCAAGAA TGTGCTGGGG ATCTTTCCTA AAGGTTGGTC ACTCCCCATG
GTTTACCGCC GGGATGGGCA GAAGCAGGAG ATTCTTGTTG AACTGGCCGC TTTGCATACC
GATACGGAAC TGATGGAATT TGCCTCAGGT GGCGCAGCCC GTCCTGCAGA AAAACCCGGG
CAGCCCAAAC CCGGTCAACC CAAACCGGGA GAAAAGCCGA CTCCTCAAGA GTCTCCCCCG
GAAGGACACT CAGAGAAGCC TGCTGAAAAG CTTTCTCCAG AGCTTAAAAA GCTCTTCCAA
TCGAAAGCCG GATTTACCAA CTATCACTTC AATCAACGGG AACAGAAACG CCTCATCGGG
CATTTGGCGA GTCTCTCTGG TTGGCGGGGT GCCACTGGTT TGTGGAAGTT CGCAGGGGAC
GACGCCAAAG GTACGAATCT TTCGCTGATT CTTTCGCCAG ATGGTGCTGG CATGCAGTGG
GGTGAAACTC CGTTTCTTCA GCCCGCTGCA GGAGCCAACT GGATTGATGA ACCACCATCC
AGCGGAGGAT TTCTTGCTGC TATGCTGCAC TGGAAATGGC TGCTGACCGA AGGCCCGGAG
GCATTTTCTG ACGTCTACTA TCTGGGTACA CAACCCCTGG ATGGCCAATT GGGTGATGCT
CTTAACACCC AACTTTACGA TGCACTGGTT CTCTCGAAGA CCGGGGCTAC CATGACAGTC
TTCTTCCGTG AGGATGGAGT GATTGCCGGC TTTGATTTTA AGGCCTCCCG CGACCAGCCA
ACCTGCAATA TCAGGTTCTC TTCATGGGGG ACACTCGGCG GCCACCCCTT TCCACAAGTG
CTCAAAGTCT CATCTTCTGG TCGTTCTTTT GGTGAATTCA CGCTGAAAAC CTTCGAGCAG
AAATCCTCCA CTTCCAGCGA GGCCACTCGA TGA
 
Protein sequence
MQYAIRFDCF RLMMVIGLMI PAFPQLLTRA FADQIVPGNT SLSNDTQDAG QSQPEKIPAI 
VKEAEQKRIQ MIRDVSPAVV AIFSSSGDGG GSGVLISPDG FALSNFHVTS GAGNFMKCGL
NDGKLYDAVI VGIDPTGDVA LIQLQGRQDF PFARMGNSDL LKPGDAVFAM GNPFLLATDF
TPTITAGIVS GLHRYQYPAG TFLEYADCIQ TDASINPGNS GGPLFNLQGE LIGINGRGSF
EKRGRVNSGA GYAISINQIR YFLGHLKSGR IVDHATLGAT VRSGSSREVL VDQVLEGSSA
WNAGLREGDE IVTFAGRPMG SVNQFKNVLG IFPKGWSLPM VYRRDGQKQE ILVELAALHT
DTELMEFASG GAARPAEKPG QPKPGQPKPG EKPTPQESPP EGHSEKPAEK LSPELKKLFQ
SKAGFTNYHF NQREQKRLIG HLASLSGWRG ATGLWKFAGD DAKGTNLSLI LSPDGAGMQW
GETPFLQPAA GANWIDEPPS SGGFLAAMLH WKWLLTEGPE AFSDVYYLGT QPLDGQLGDA
LNTQLYDALV LSKTGATMTV FFREDGVIAG FDFKASRDQP TCNIRFSSWG TLGGHPFPQV
LKVSSSGRSF GEFTLKTFEQ KSSTSSEATR