Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1809 |
Symbol | |
ID | 9138510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2353197 |
End bp | 2355089 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_003629838 |
Protein GI | 296122060 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.345903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTACG CAATTCGATT CGATTGTTTT CGTTTGATGA TGGTCATTGG TCTGATGATC CCGGCTTTTC CACAACTGCT CACCCGAGCC TTTGCAGATC AGATCGTCCC CGGGAATACA TCCCTCTCGA ACGATACTCA GGATGCCGGG CAGTCCCAGC CCGAGAAGAT TCCTGCGATC GTGAAAGAAG CTGAGCAGAA GCGGATTCAA ATGATCCGCG ACGTCTCACC TGCAGTTGTC GCCATCTTTT CGAGCTCAGG CGATGGAGGT GGATCGGGCG TTTTGATTTC CCCCGACGGA TTCGCTTTGT CGAATTTCCA CGTGACCAGT GGTGCTGGCA ACTTCATGAA GTGCGGACTC AACGACGGAA AACTCTACGA TGCCGTCATC GTAGGAATCG ACCCGACAGG CGATGTCGCA CTCATTCAAC TGCAAGGACG CCAGGATTTT CCCTTTGCCC GGATGGGAAA CAGTGATCTG CTGAAACCTG GGGATGCCGT TTTCGCGATG GGAAACCCGT TTCTTCTGGC CACGGATTTC ACTCCCACCA TCACCGCAGG GATTGTGAGC GGCCTGCATC GATACCAATA TCCTGCGGGA ACATTTTTAG AGTACGCCGA CTGTATACAG ACCGATGCTT CCATCAACCC TGGTAACTCA GGGGGGCCAC TGTTCAATCT GCAGGGTGAA CTGATCGGGA TTAACGGCCG GGGATCATTC GAGAAGCGTG GCCGTGTGAA TTCAGGGGCC GGATACGCGA TTTCGATCAA TCAGATCCGG TACTTTCTGG GCCACTTGAA GTCGGGACGA ATTGTCGATC ACGCCACTTT GGGTGCCACA GTTCGCTCGG GATCATCACG AGAAGTCCTT GTCGATCAGG TGCTAGAAGG TTCGAGTGCC TGGAACGCCG GTCTTCGAGA AGGTGATGAA ATTGTCACCT TTGCCGGACG CCCGATGGGA AGTGTCAACC AGTTCAAGAA TGTGCTGGGG ATCTTTCCTA AAGGTTGGTC ACTCCCCATG GTTTACCGCC GGGATGGGCA GAAGCAGGAG ATTCTTGTTG AACTGGCCGC TTTGCATACC GATACGGAAC TGATGGAATT TGCCTCAGGT GGCGCAGCCC GTCCTGCAGA AAAACCCGGG CAGCCCAAAC CCGGTCAACC CAAACCGGGA GAAAAGCCGA CTCCTCAAGA GTCTCCCCCG GAAGGACACT CAGAGAAGCC TGCTGAAAAG CTTTCTCCAG AGCTTAAAAA GCTCTTCCAA TCGAAAGCCG GATTTACCAA CTATCACTTC AATCAACGGG AACAGAAACG CCTCATCGGG CATTTGGCGA GTCTCTCTGG TTGGCGGGGT GCCACTGGTT TGTGGAAGTT CGCAGGGGAC GACGCCAAAG GTACGAATCT TTCGCTGATT CTTTCGCCAG ATGGTGCTGG CATGCAGTGG GGTGAAACTC CGTTTCTTCA GCCCGCTGCA GGAGCCAACT GGATTGATGA ACCACCATCC AGCGGAGGAT TTCTTGCTGC TATGCTGCAC TGGAAATGGC TGCTGACCGA AGGCCCGGAG GCATTTTCTG ACGTCTACTA TCTGGGTACA CAACCCCTGG ATGGCCAATT GGGTGATGCT CTTAACACCC AACTTTACGA TGCACTGGTT CTCTCGAAGA CCGGGGCTAC CATGACAGTC TTCTTCCGTG AGGATGGAGT GATTGCCGGC TTTGATTTTA AGGCCTCCCG CGACCAGCCA ACCTGCAATA TCAGGTTCTC TTCATGGGGG ACACTCGGCG GCCACCCCTT TCCACAAGTG CTCAAAGTCT CATCTTCTGG TCGTTCTTTT GGTGAATTCA CGCTGAAAAC CTTCGAGCAG AAATCCTCCA CTTCCAGCGA GGCCACTCGA TGA
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Protein sequence | MQYAIRFDCF RLMMVIGLMI PAFPQLLTRA FADQIVPGNT SLSNDTQDAG QSQPEKIPAI VKEAEQKRIQ MIRDVSPAVV AIFSSSGDGG GSGVLISPDG FALSNFHVTS GAGNFMKCGL NDGKLYDAVI VGIDPTGDVA LIQLQGRQDF PFARMGNSDL LKPGDAVFAM GNPFLLATDF TPTITAGIVS GLHRYQYPAG TFLEYADCIQ TDASINPGNS GGPLFNLQGE LIGINGRGSF EKRGRVNSGA GYAISINQIR YFLGHLKSGR IVDHATLGAT VRSGSSREVL VDQVLEGSSA WNAGLREGDE IVTFAGRPMG SVNQFKNVLG IFPKGWSLPM VYRRDGQKQE ILVELAALHT DTELMEFASG GAARPAEKPG QPKPGQPKPG EKPTPQESPP EGHSEKPAEK LSPELKKLFQ SKAGFTNYHF NQREQKRLIG HLASLSGWRG ATGLWKFAGD DAKGTNLSLI LSPDGAGMQW GETPFLQPAA GANWIDEPPS SGGFLAAMLH WKWLLTEGPE AFSDVYYLGT QPLDGQLGDA LNTQLYDALV LSKTGATMTV FFREDGVIAG FDFKASRDQP TCNIRFSSWG TLGGHPFPQV LKVSSSGRSF GEFTLKTFEQ KSSTSSEATR
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