Gene Plim_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1803 
Symbol 
ID9138504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2341122 
End bp2343443 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629832 
Protein GI296122054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTGGC TTTCTTCGCT ATTTTTCAAT CCTTCGATTG CACTGATGGG CGCCGGGCTC 
ATCGCTGTGC CACTCATTAT CCATCTCATC AATCGAGTGC GATATCGACG GGTTCAGTTT
GCAGCCATGG AGTTTCTGCT CCAGGCAGAA CAGCGAAATC GTCAACGTCT GTTGATTGAA
CAATTGCTCC TGCTTCTGCT GAGGACATTA ATCGTCCTGG CACTCCTGCT GCTTATTGCG
AGGCTGGTGC TCGATCCTTC ACAGTTCGCG CTCTTTCGCG AATCGCGGAC ACATCACGTC
GTGCTGGTGG ATGACAGTGC CTCAACCCGT GAGCGACGTG GAGAAACCAC GGCCTGGGCT
GAAGGTCTTG GAGTCATTCG AAAACTGGCG GCAGAAGGTG CCCGCCGTCC GCAGACCCAG
AGATTGACGG TCTTACTCGC CTCACGACCT GATAAGCCCT TACTGACTGA CCGGGATGTC
AATCAGCCAC TGGTTGAAGA ACTCGCGTCG CGACTCGACC CTGTCTCCTT TAAGCCGACT
CATCAACGGG TCGATTTCCT TAAAGGGATC CAGTCGGCGA GTGATCTATT GTTGGCTGAC
AAAGCCGGCG TGAGGGAACT ACACGTTATT TCTGATTATC GCTCGCGCGA CTGGAACGAT
CAGAAACCAC TGGCTCAGGC CATGGAAACG CTGGCCGAAG CCGACGTGGG AATCCATTTA
ATTCGCACCA CCCCTCAGGC CGGTCCCAAT CTGGCAATTA CGAGGCTCGA TGGTGCTGTC
TCCACAGCCG CCGCTGGTGT TCCACTCCGA TTAACTGCCG GGATCACCAA CTTTGGTACT
GAAGTCGTCA CCGATGTTCG GGCTTCAATC TACGACAACG GAGTCAAGAC ACCCACCACT
GTCATTTTTG ACCGCATCGA ACCCGGTACA GAAGTTCTCC ACGAAGTGGA CCTGCAATTC
CCTTCACCTG GTTATCGCCG AGTTGAAATT CGCCTCGATG CCGATGGGTA TCCGGTCGAT
AATGTGCGGC ACTTAAGTGT CAATGTTTCG GCAGCGATTC CCGTGTTGAT TGTCGATGGT
GATCCCGCTG GTGACGCCGC CTCGTATGTT GCGGATGCCC TCGCTGCTGA CCCAGCGGCA
ACGGGCTTTC AGACCACGAT CGATAACCCG GACATTCTGC GTCGCAGGCC CTTGGACGAT
TACCGCTGTA TCTATCTGCT CAATGTGGGC GAACTGCCGC CGGATTCTCT CGACTATCTG
GAGAAGTATG TCCGCCGGGG TGGTGCCTTG ATGATGGCTC TGGGGGATTC TGTCCGCAGT
GAAGCATTCA ATCGGGTCTT TCATCGCGAG GGTGAAGGGT TATCACCTTT GCCTCTGGGA
AATGCTCCCC TCGAATTTGC TACTGATGTC ACATCCACAG AACCCGATCT CAAAGCGGGA
AAGCATCCGG CATTCGCGAT TCTCCAGGGG GATGACAACC CTTTTCTCGA TGCTGTTCAT
ATTCAAAAAC TCTTTGAGCC AGCGGTTGGC TGGGAAGTCG ATGACGTTGT CCGTGGTGAC
AATGTCAAAA CCATTGCCAA ACATAAGAGT GGCCGCCCCG TCATGCTGGA GAAGCCCTAC
GGTGCAGGGA AGGTAACTTT GCTGTTGACC ACAGCCCAGC CAGCGTGGAA TGACTGGGCA
CTGAACCCGT CCTATGTCGT CTTTCAGCTC GATCTGCTCA AATCGCTGAT TTCCTCCGAC
AAGAACGAAG CTTTAAGAGT CACGGGTGAA CCAATCCTGC TCTCTCTTGA CCCGGCTCTC
TACACCGATC AGGTCGAGTT GTCGATCCCT GATATTGACG GTCAGAGAAC TGTGAGGCTG
CAGGCTTCTC CTCAAGACAG CCAGACCTCC GCCTCCAGCA AACCCAAGGG AAATGACGCT
TCGACATCCA CCCGACCAGA TACGACTCCA GCCTCTAATC AAAACGCCGC AGGTGGTATT
CGGCTGGTCG TCGAAGAGAA AGAGACCGAT TTGCCCGGCA TCTACAGCGT TCGCCTGACA
ACCCAGAATC AGACCACCGA AGAGAAACTT TACGCCTATA ATGTGCCGCT GGAAGAGAGC
CAGCTGGCAG TCATTTCTGT CGATTCCTTG CGGAAAACAA TGGGCAATAA CGAAAAACTA
TCGATTCATG AGGCACAGGA TGTCTCCTGG ATCGAAGGGG AAGAGGCAGG TTCGGAACTT
CGTACCAGTT TGCTGGCGGC GCTCGTGATT CTTCTGCTGG CTGAGCAGTG GCTCAGTTAT
CGACTCAGTT ACCACCCGGC GAAAGGTCAG GTGGCGCGAT GA
 
Protein sequence
MTWLSSLFFN PSIALMGAGL IAVPLIIHLI NRVRYRRVQF AAMEFLLQAE QRNRQRLLIE 
QLLLLLLRTL IVLALLLLIA RLVLDPSQFA LFRESRTHHV VLVDDSASTR ERRGETTAWA
EGLGVIRKLA AEGARRPQTQ RLTVLLASRP DKPLLTDRDV NQPLVEELAS RLDPVSFKPT
HQRVDFLKGI QSASDLLLAD KAGVRELHVI SDYRSRDWND QKPLAQAMET LAEADVGIHL
IRTTPQAGPN LAITRLDGAV STAAAGVPLR LTAGITNFGT EVVTDVRASI YDNGVKTPTT
VIFDRIEPGT EVLHEVDLQF PSPGYRRVEI RLDADGYPVD NVRHLSVNVS AAIPVLIVDG
DPAGDAASYV ADALAADPAA TGFQTTIDNP DILRRRPLDD YRCIYLLNVG ELPPDSLDYL
EKYVRRGGAL MMALGDSVRS EAFNRVFHRE GEGLSPLPLG NAPLEFATDV TSTEPDLKAG
KHPAFAILQG DDNPFLDAVH IQKLFEPAVG WEVDDVVRGD NVKTIAKHKS GRPVMLEKPY
GAGKVTLLLT TAQPAWNDWA LNPSYVVFQL DLLKSLISSD KNEALRVTGE PILLSLDPAL
YTDQVELSIP DIDGQRTVRL QASPQDSQTS ASSKPKGNDA STSTRPDTTP ASNQNAAGGI
RLVVEEKETD LPGIYSVRLT TQNQTTEEKL YAYNVPLEES QLAVISVDSL RKTMGNNEKL
SIHEAQDVSW IEGEEAGSEL RTSLLAALVI LLLAEQWLSY RLSYHPAKGQ VAR