Gene Plim_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1794 
Symbol 
ID9138495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2326852 
End bp2327301 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function UPF0040 
Protein accessionYP_003629823 
Protein GI296122045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.967347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTGA CGGGTACCTA CCTGCGAATT CTCGACGAGA AGCAGCGTGT GGGCCTCCCC 
AAGCGACTAC GCGAAGACTT GGGTTGCCTC GAATGTAACC ATCTGTACAT CGCCCCTGGG
ACTCAAAAAT CACTGGTACT CTACTCTCCG GAAGGTTTCA ATTGCCTGTC GGAAACATTA
AGTTCCAGAG GCTTTCCCGG CGGTGATCAA ACGTATTTGC GGTTGTTTTA CTCTTCTGCG
GAGAGGGTCG ATTTAGATAA TCAAGGACGA TTCCGGATAC CAGATCGCCT GTCAACCCAC
GCGTTGCTTG ATAAAGAAAT CTATCTGCTG GGCGTGAATG ATCATGTCGA AATCTGGGAT
CGGGAACATT GGGATTTGTA CACGAGAACG TATTCCCCAC AGTTCGATCA GCTCTCCTCT
CCGGGGAACT CCTGGCAGAT TGTGGGCTGA
 
Protein sequence
MPLTGTYLRI LDEKQRVGLP KRLREDLGCL ECNHLYIAPG TQKSLVLYSP EGFNCLSETL 
SSRGFPGGDQ TYLRLFYSSA ERVDLDNQGR FRIPDRLSTH ALLDKEIYLL GVNDHVEIWD
REHWDLYTRT YSPQFDQLSS PGNSWQIVG