| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1765 |
|---|
| Symbol | |
|---|
| ID | 9138466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 2285009 |
|---|
| End bp | 2285824 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | RNA methyltransferase, TrmH family, group 3 |
|---|
| Protein accession | YP_003629794 |
|---|
| Protein GI | 296122016 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.560778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAAAC TACTTGGAAA CCATAATCGT TCTTGGATCT GGGGACGCCA CCTCGTATCG
GCGACGATTC ACGCCAAATA CTGGATTCCT CTTGAGTTGC ATTACGATTC TCATCGATTT
TCGCCGCATG ATCCTCTAGG CGATCCCATA GTGGGCGATT TCCCACTGGG CGATTCCATA
GAAGAAGCCC ATTCGACTTC ACTCAAAAAT CTTTGTGAAG CAGTCGGGAT CCAACTCGTG
GCTTCGACTG CTGATCAGCT CTCCCGTTTG ATTCGAGCGG AAGATCATCA GGGGCTGGCT
GCCCGGATGC CCGAGTTTCC TTATGCGGAT TTTGAAGGTC TGTTCCAGGC ACAACTCCCG
GCGCTGCTGG TCATCCTCGA TGGAATTCAA GACAGCTTCA ATCTGGGTGC CATTATTCGC
TGTGCAGAAG CCTTGGGAGC CGGTGGGATC GTGCTTCCGG AAAAAGGTCA GTCGGGTGTG
AACAGTCAGG CAGCAAGAAG TTCTGCCGGT GCTGTCAACT TTCTGCCAAT CTATCGCGTT
CCAGCCCTCG ACCGAGCGAT CGATCAGTTA AAGTCGAGGG GCATGAAAAT CCTGGCTGCT
ACAGAGAAGA GTGAGCAATC CCTCTGGAAT GTCGTGATCC CCGCACCGCT GTGTCTGATT
ATCGGCAACG AAGGGAAAGG TGTTTCCTCT GCTCTGCTAT CAGCTTGTGA TATTCAGGTC
CGGATCCCCA TGGCGGGGCA AACATCGTCT TTGAATGCTG CTGTGGCTGC CGGGATCTTA
CTGGCCGAAA TTCAGCGGCA ATCTTTGAAG ATTTAA
|
|---|
| Protein sequence | MPKLLGNHNR SWIWGRHLVS ATIHAKYWIP LELHYDSHRF SPHDPLGDPI VGDFPLGDSI
EEAHSTSLKN LCEAVGIQLV ASTADQLSRL IRAEDHQGLA ARMPEFPYAD FEGLFQAQLP
ALLVILDGIQ DSFNLGAIIR CAEALGAGGI VLPEKGQSGV NSQAARSSAG AVNFLPIYRV
PALDRAIDQL KSRGMKILAA TEKSEQSLWN VVIPAPLCLI IGNEGKGVSS ALLSACDIQV
RIPMAGQTSS LNAAVAAGIL LAEIQRQSLK I
|
|---|
| |