Gene Plim_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1721 
Symbol 
ID9138422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2234680 
End bp2235357 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629750 
Protein GI296121972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.505019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTC CCAGCATGAT TGGTGGCGGC ATTGTTGGTG GAGCACTAGG CGCGACGATC 
TGGGCCGCGA TCATCTATTT CACCAACTAT GAAGTCGGCT ATGTCGCCAT TCTGGTGGGG 
ATACTCGTCG GCTACTGCGT CAAGCTGGGC GCTGGGACAT GGCAAGGCTT TGTCCCAGGC 
GCGATTGCAG CCGTGCTCGC GATTGTCTCT GTGACGGGTG GTAAGTATGC AGCAGCCACG 
CTTCAAGCCA ATGAAGTTGT CCAGAAAATG GATACGCGGG TGACTGATGA CAATTTAAAG 
CTGGGAATGG CTGATCAACT CGTCACGGAA AGAACTGAAA AACAGCAGCC CATCGAATGG 
AGAAATGGAA AAAATTCCGA CACCGCAGAA TCACTGGAAG ATTACCCGGT CGATATTGTC 
GAGTCTGTGA ACAAGTCCTG GGAAACTCTC ACGGCTGAGC AGAAAGCGGC TCAACTCGCA 
GAAAGTCAGA AAATGATTGA CGAATTTCAA GGCGAAATGG CTACCCTGAT TCGTCATCAA 
GCCTTCATGG CCAGCTTCAG TCCTTATGAT CTGCTGTTTT TTGGTTTGGC GACATATGCG 
GCTTTTCAAT TGGGCAGTAA TGCCGCCCCG AAACCGGAAA TACCCACCAA ATCTGAACCG 
TCTGACCAGA CAGCATGA
 
Protein sequence
MNFPSMIGGG IVGGALGATI WAAIIYFTNY EVGYVAILVG ILVGYCVKLG AGTWQGFVPG 
AIAAVLAIVS VTGGKYAAAT LQANEVVQKM DTRVTDDNLK LGMADQLVTE RTEKQQPIEW 
RNGKNSDTAE SLEDYPVDIV ESVNKSWETL TAEQKAAQLA ESQKMIDEFQ GEMATLIRHQ 
AFMASFSPYD LLFFGLATYA AFQLGSNAAP KPEIPTKSEP SDQTA