Gene Plim_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1677 
Symbol 
ID9138378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp2174855 
End bp2175421 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content53% 
IMG OID 
ProductThiJ/PfpI domain protein 
Protein accessionYP_003629707 
Protein GI296121929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCACAGC CCAAAGTTCT CATCGTTGTC GGAGACGCGA CAGAAACCGT CGATACGCTT 
TATCCTTACT ACCGCTTAAT TGAAGGGGGA TATCAGCCTG TCGTGGCTGC TCCGGAGAAA 
CGCAAGTATC AGATGGTTCT GCACGAAGTG AAGCCCGGTT GGACGATCAC CAAAGAGTGG 
GAAGGCTATT CGATTGATGC AGAGATCGCC TTCAAAGACA TTCGCCCTGA AGATTATGCC 
GGAATCTTCT TCAGTGGGGG CAGGGCTCCT GAATACATTC GCGAAGACGA AGATCTGCTG 
AACATCACCC GCTGGTTCTG GGAAAAGCGC CTGCCGATGG CCAGTGTTTG CCATGGAGTT 
GAAATTCCGG CGCGTGCTGG CATTGTCAAA GGTCTACGCA TGGCGACTGT CGCCAAATGC 
CGCTTCGATC TTGAAATCTG CGGCGGAATC TACGTCAACG AACCCTGTGT GATCGATCGC 
AACATGGTGA GTGGTCGCAC CTACCACGAC AGCGGCCACT TTGTGGGCCC ATGGATTCAA 
ATGCTCGATC GCTGTCGCAA AGCCTGA
 
Protein sequence
MSQPKVLIVV GDATETVDTL YPYYRLIEGG YQPVVAAPEK RKYQMVLHEV KPGWTITKEW 
EGYSIDAEIA FKDIRPEDYA GIFFSGGRAP EYIREDEDLL NITRWFWEKR LPMASVCHGV 
EIPARAGIVK GLRMATVAKC RFDLEICGGI YVNEPCVIDR NMVSGRTYHD SGHFVGPWIQ 
MLDRCRKA