| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1675 |
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| Symbol | |
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| ID | 9138376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2171833 |
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| End bp | 2173512 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003629705 |
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| Protein GI | 296121927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAATC TGATCTTCTC CATGATCGGC AGTTTCCTGG CACGGAAAGT CGGCCAGCAG
CGAATGGCGT TTCATCAAGC CACAATGCGC CCCCGCGAAT CGCAACAGGC CTTCTTAAAA
GAATTACTTG CTGCCCATGC GGATTCGGCG TTTGGCAAGG ATCATTTTTT TCGAGAAATT
CAAACTGCGG CTGATTTCCA GAAGAGATTG CCAATCGCTG AGTACGAGAA CTTTGCCCCC
TACATCGAGC GCGTCAAAGC GGGTGAAACC ACCGCGATGT TCTGCAACGA ACAGATTGTC
ATGTTCAATC TCACCAGTGG TACGAGCAGC ACTCGAAAAT TTATTCCCGT CACCAATCGC
TACCTCAGTG ATTACCGACG CGGCTGGTCG ATGTGGGGCT TACAGACTTT CGAAAAGTAC
CCGCAGCTTT TCCTGCAGCC AAAAGTCAGC TTTGGCAGTG CCTCGAAGGA ATCGGTCACG
TCAGCGGGCA TTCCGTGTGG CAGTTTGAGT GGCCTGACTG TCAAAATGAA TCCTGCTGTC
GTACGCAGCA CCTATTGCCT CCCTGCTGAT ACGGCTGACC ATGCCGACGC TTTCGCCAGA
TGTTACCTCA ACTGGCGAAT CGGCATCCAA AGAAACCTTG GCATGGGTGT CGCCCCGAAT
CCGGGTTTGC TTCTCCAGTT CGCTCGCTAT GGAACCGAGA ACGCCGAATG TCTCATTCGC
GAACTTCATG ACGGCACTCA TTCCTGTACG GCTGCCTTGC CGCGGCATCT CCAGAATTGG
CTCAAACGCC AGATCCGCCC AAATCGCAAA CGTGCTCGCG AACTGGAGCA GATCTTTACT
CGCCAGATGA CTCTCCACCC GAAAGATGTC TGGCCTCAGC TCAAACTGAT TGCCTGTTGG
CTGGGTGGGC CAACCAGAGC TTATATCTCA CAGATTCCCG AGTATTTCGG AGATGTCACA
TTGCGGGATA TTGGCCTGAT CTCCAGTGAA AGCCGCATCA GCCTTCCCAA AGAAGACAAC
ACACCTGCGG GTATTCTCGA TGTGACCAGT GCCTATTTTG AGTTCGTACC TGTCGACGAA
ATGGATTCCA GCAATCCCGT TGTGCTCGAT GCTGCCGAAC TCGAAACCGG CAAAGAGTAT
TACATCCTTT TGACAACGAC CAGTGGGCTC TATCGATACA ACATTCATGA TGTGGTACGA
GTCGTTGACT GGCACGAAAA AACACCCATG ATCGAATTTC TGCATAAAGG AAGCAGAATT
GCCAATCTCT TCGGTGAAAA ACTCACGGAG AGCCAGATTG TCAAAGCGGT CACAACGTTC
GTTCAATCAA CAGCCACGCC TCTGGGCGAT TTTTCACTGA CTATGCCTCT GCCACATGAG
CCGATGGCCT ATCGGTTTTA CGCCGAAATG CGAGATGCAT TCTCTTCCGA TTCGATCGCC
ACTCTGGCTC GGCAACTGGA CGAATCTCTG GGTGAGCAGA ACTATCTGTA CCGCCGTAAA
AGAGTCGAAG GCCTGCTCCA TCCCCTGGAA TTGATCGTCA TTCCACAAGG TGCCTGGCGC
GCCTGGGATC TCCGCCAACT CGCCCGCAAT GGCGGCACCA TGGATCAGTA CAAGCATCCT
TTTCTGATCA CCAATCGCAG CCTGATTGAC GATCTTCAGG TTGAGCCTGT CAGTTCTTAA
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| Protein sequence | MLNLIFSMIG SFLARKVGQQ RMAFHQATMR PRESQQAFLK ELLAAHADSA FGKDHFFREI
QTAADFQKRL PIAEYENFAP YIERVKAGET TAMFCNEQIV MFNLTSGTSS TRKFIPVTNR
YLSDYRRGWS MWGLQTFEKY PQLFLQPKVS FGSASKESVT SAGIPCGSLS GLTVKMNPAV
VRSTYCLPAD TADHADAFAR CYLNWRIGIQ RNLGMGVAPN PGLLLQFARY GTENAECLIR
ELHDGTHSCT AALPRHLQNW LKRQIRPNRK RARELEQIFT RQMTLHPKDV WPQLKLIACW
LGGPTRAYIS QIPEYFGDVT LRDIGLISSE SRISLPKEDN TPAGILDVTS AYFEFVPVDE
MDSSNPVVLD AAELETGKEY YILLTTTSGL YRYNIHDVVR VVDWHEKTPM IEFLHKGSRI
ANLFGEKLTE SQIVKAVTTF VQSTATPLGD FSLTMPLPHE PMAYRFYAEM RDAFSSDSIA
TLARQLDESL GEQNYLYRRK RVEGLLHPLE LIVIPQGAWR AWDLRQLARN GGTMDQYKHP
FLITNRSLID DLQVEPVSS
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