Gene Plim_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1652 
Symbol 
ID9138353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2136232 
End bp2137305 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629683 
Protein GI296121905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGCG CGACTTTGTG GGCCTGCTGT GTGTGGTTAT CTTTCTCTGC CAGTTTACCG 
GCAGATGATC GCTGCTTGGA AATTTCGTAC GAAGGAGAAA TGTTGCGCGG GCGCGTGGTG
GCCAGGGATT CGGTTCAATG CTGGTTTCAG TTGGCTGATG GATCTCAACG GTTGATCGAT
CTCGCCAAAG TGAGTCGTTA TCAGGTGTTG CCGGGCGAAT TTTCGCCCAT GACAACGGTC
GAGATGAAGA GTCAGCTCGT GCGGGAATGG CCAGCTCTGC GTGTGGCAGC GACAGATGGG
TTGATCGTGG CGGCACCTGC GAGTGTAGAA AACGAACTGA AAGAGTTGTT CGATGAAGTT
CGCCGCGATT TTGTGGGCTG GTTGAGTGTG TATGGCCATA CTCCTGCGCC ACTGGAGTTT
CCGCTCGTCG TTGTCATGCC GTCCCGACAG GCTGAGTTTG ATCAGCTGGT GAAGATTCGT
CCCAAAAGAG CACGGGAAAA TCTGGCAGGG GTTTATCTGG TCGAGAGTAA TCGAATTTTG
CTCTCGCCAG GTGAAAAGCA TCAATCGTTG CGTGAACGTC ATGCCACACT TATTCACGAA
GCGGTTCACC AACTGGGTTT CAATTATGGT CTGCATTCGA GAATTGAGCC GGGGCCCGTC
TGGATGATTG AAGGCTTAGC TATGGCGTTC GAGAATGACG CCCTACGAAA GCGGGATCGG
CAAGCGAGTG CGTGGGATCG CATCAACCGG GAAAGGTTTC TGCACTTTCG TGCCATGCAA
CAGAAGATGC CTCGGGGCTG GTTGCGAGCT TTGATCGAAA GTGACGATCT CTTTGAAACT
CGTGCTCTGG ATGCGTATGC CCAAGCCTGG GCTGTGACAT TCTTTCTGCT GGAAACCAGG
CCCAGCCAAT ATGTTCGACT GCTCACGACC TCTCATGAAA TGGAGCGAAA GGCAGACGAA
TCGATTACTT CCCGGCGGCT ACGCCATTTC ATTGAAAGTC TAGGCAAAGA ACCTGAAAGC
CTGGAAATCG AGATCAAAAG GTTCTTTGAG GAACTTTCTC CTCGCAGTCG ATGA
 
Protein sequence
MFRATLWACC VWLSFSASLP ADDRCLEISY EGEMLRGRVV ARDSVQCWFQ LADGSQRLID 
LAKVSRYQVL PGEFSPMTTV EMKSQLVREW PALRVAATDG LIVAAPASVE NELKELFDEV
RRDFVGWLSV YGHTPAPLEF PLVVVMPSRQ AEFDQLVKIR PKRARENLAG VYLVESNRIL
LSPGEKHQSL RERHATLIHE AVHQLGFNYG LHSRIEPGPV WMIEGLAMAF ENDALRKRDR
QASAWDRINR ERFLHFRAMQ QKMPRGWLRA LIESDDLFET RALDAYAQAW AVTFFLLETR
PSQYVRLLTT SHEMERKADE SITSRRLRHF IESLGKEPES LEIEIKRFFE ELSPRSR