Gene Plim_1623 details

Gene Information

• Locus tag: Plim_1623
• ID: 9138324
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 2098868
• End bp: 2100820
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 55%
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003629654
• Protein GI: 296121876

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.997433
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACCGC TGCCGAAGGA TTCCCCGCCC CCACCTGCTC CCCGCCTTCC CAGCAACCGG 
GAAACTGACG ACGAACCTAA AAAGTCTTCG TTTCCCGCCT CCTGGGTGAT CCTGATTCTC 
ATCCTCACTA TTGGCTTTGT CTGGATGTGG CAGGCTTCTC CTTCCAATCA AGGAAAGCGC 
GTCGACTACA TCTTTGTCTG GCGGCAGGCC GAAGAGGGCA AAATCGCCAA AGTGACTTAT 
CACGGCGAAC TCCTCACGGG AACATGGAAA AACGAAAAGG GAACTGTCGA CCCCGAAGAT 
CCTGATAAAA TTATTCCTGC CAATTTCAAT ACCATTCTCC CGTTGAAGCA GGATGACGAC 
CTACTGCGGT TACTGCGCGA GAAAGGGGTC AAAATCTCGG CTGAACCTCA GGACCCCGGC 
CTCGGGATGA CCTTGCTCCT GTGGCTCTCC GGGCCACTCC TGATTCTAGG TGTCTTTTAC 
TACATGATGC GTCGTAACAC CGACGCCATG GGTGGCGGCG GCATGATGGG CAATTTCATT 
CGCAGCCCTG CCAAAAAATT CAAAGCCAGC GAACAGATGA CAACCTTCGC CGATGTCGCG 
GCGATGGAGC AGGCCAAAGG CGAACTGGCA GAAATCGTCG AGTTCCTCAA AAGTCCGCAG 
AAGTTTCAAA AACTGGGTGC CCAGATCCCC AAAGGTGTCC TGCTCATGGG GCCACCCGGG 
ACAGGCAAAA CTCTGCTGGC CAGAGCCACA GCTGGCGAAG CGGGTGTCCC TTTCTATTCC 
ATCAACGGCT CTGAGTTCAT CCAGATGTTT GTGGGTGTCG GCGCCAGCCG CGTGCGTGAT 
CTTTTCCGCA ATGCGAAGGA AAACAGCCCC TGCATACTGT TCATCGACGA AATTGATGCC 
GTCGGTCGAG TTCGTGGAGC AGGGCTGGGT GGTGGACATG ACGAGCGGGA ACAGACTCTC 
AATCAGATCC TGAGTGAGAT GGATGGTTTT AATCAGACCG AAGCTGTCAT TGTGATAGCT 
GCGACAAACC GTCCCGATGT TCTCGATCCC GCACTCTTGC GTCCTGGTCG ATTTGACCGC 
CACATTTCGG TGGATCGATC CAATAAAACA GGACGCGAAG CCATCTTGAA GGTTCATTGC 
CGGAAGGTGC CATTAGCCGA TGATGTCGAC CTGGCTGCGA TTGCCTCTTC CACGATTGGT 
TTCTCGGGTG CAGAGCTGAA GAATCTGGTG AATGAGGCGG CTTTGGGAGC CGCTCGTGAT 
GGGCGTGATA AAGTTACAAA AGGCGACTTT GATCTGGCTC GCGACCGCGT TCTGATGGGT 
GCAAAGCGTG AGGAAGTCTT ATCGCCCCAT GAACGCGAAA TGACGGCTTA CCACGAGGCT 
GGCCACGCCT TACTGGCATG GTTCCAGCCA GAGCTTGATC CGGTTCATAA AGTGACGATC 
ATCCCGCGTG GGCGCGCTCT GGGTGTGACT CAACTGCTCC CGAACGAAGA GCGATACAAC 
ATTGGCGAGA AGCGCATCCA TGCCCAACTC GTCTTCATGC TGGGTGGTCG TGCTGCCGAG 
AAGCTAGTCT TCGACGAGTA TTCGGCTGGG GCCGAAGATG ATCTCAAACG GGCCACTCAA 
CTCACCCGGC GGATGGTCAG TCATTGGGGG ATGAGCGAGG TCATCGGGCC GGTCGCCTTC 
CGGAGTGGCG AAGAACATCC ATTCCTGGGG AAGGAAATGT CAGAGCCTCG CGAACACAGC 
GAAGCGACGG CTCATCTGAT CGATCAGGAA GTACAGCGAA TTCTGGTCGA AGCCGCCAAT 
AAAGCCCGAC AAATGCTGGT CGATCATCGG GAAGCTCTCG ATAAACTTTC GATGGAACTG 
GTGAAAGCGG AAGCTCTCGA TTACGACCAG ATGGTCGGGA TCATCGGTGA ACCAATCCCG 
AGAACTGAGC ACACTCTTGT GAGTAATGCG TAA 

 

Protein sequence

MAPLPKDSPP PPAPRLPSNR ETDDEPKKSS FPASWVILIL ILTIGFVWMW QASPSNQGKR 
VDYIFVWRQA EEGKIAKVTY HGELLTGTWK NEKGTVDPED PDKIIPANFN TILPLKQDDD 
LLRLLREKGV KISAEPQDPG LGMTLLLWLS GPLLILGVFY YMMRRNTDAM GGGGMMGNFI 
RSPAKKFKAS EQMTTFADVA AMEQAKGELA EIVEFLKSPQ KFQKLGAQIP KGVLLMGPPG 
TGKTLLARAT AGEAGVPFYS INGSEFIQMF VGVGASRVRD LFRNAKENSP CILFIDEIDA 
VGRVRGAGLG GGHDEREQTL NQILSEMDGF NQTEAVIVIA ATNRPDVLDP ALLRPGRFDR 
HISVDRSNKT GREAILKVHC RKVPLADDVD LAAIASSTIG FSGAELKNLV NEAALGAARD 
GRDKVTKGDF DLARDRVLMG AKREEVLSPH EREMTAYHEA GHALLAWFQP ELDPVHKVTI 
IPRGRALGVT QLLPNEERYN IGEKRIHAQL VFMLGGRAAE KLVFDEYSAG AEDDLKRATQ 
LTRRMVSHWG MSEVIGPVAF RSGEEHPFLG KEMSEPREHS EATAHLIDQE VQRILVEAAN 
KARQMLVDHR EALDKLSMEL VKAEALDYDQ MVGIIGEPIP RTEHTLVSNA