Gene Plim_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1558 
Symbol 
ID9138258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2006723 
End bp2007169 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629590 
Protein GI296121812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACAGT TTGAGAGTCA GGTTCAGCTT CCTGCAGCAC CGGAAAAAAT CTTCGATTTT 
ATCTCACGTC CGAAGAATCT CGCTTCGCTG AGTCCTCCAG ATGCTGGTCT GGTTTTTGTG
GAAGCTCCCG AAGTGTTATC TCTCGGCAGC ATCATGGTCT GTCGAGTTCA GGCTTACGGC
GTCGTCCAGC AACTTGAGCA GAAGATCACG GTCTTTAATT CTCCCGTGGG CTTTCGCGAG
GAACTGATCA AAGGCCCTAT TAAAAGTTAC ATTCACGATT ACATCATCGA ACAGCAGGAT
GATGAGTTGT GCGTGCTGAA AAATCGAATT GAGTTTGAGC CACCGGGAGG CCTGATTGGC
CTGATGGTCA CTGCCGACAA GATTCTCGAT CAACTGGAAG ATGCCTTCGC TTATCGCCGT
CAGATGCTGG TCAAGGCGTT TTCGTAA
 
Protein sequence
MPQFESQVQL PAAPEKIFDF ISRPKNLASL SPPDAGLVFV EAPEVLSLGS IMVCRVQAYG 
VVQQLEQKIT VFNSPVGFRE ELIKGPIKSY IHDYIIEQQD DELCVLKNRI EFEPPGGLIG
LMVTADKILD QLEDAFAYRR QMLVKAFS