Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1554 |
Symbol | |
ID | 9138254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 2001236 |
End bp | 2002201 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003629586 |
Protein GI | 296121808 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.884853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAC GTGAGACTGG CGCAGGCCGC TCATCTTCTC CAGAGAACCG GCCCAGACCT CAGCGGTCTG CAAATAAACC AACGGATGAG GATCCTTTTT CGAGAGACGA AGAAGCGGCA GATCCCTGGG TGAGAGCATC GCGCAAACTC TCAGGTTCGA AGTATCCTCC ACGAAGTACC AGCCCGAAAA AGACAGAGAG AAAATCGACT TCGGGGGCCG GACGCAGTGG AGCAAGTAAC CCACCACCAG CCAGGGCGCT GCATGGGCGA TCGGCATCCG CGCGGACAGG AACGACACGC CCGGGAAGAC GTGAAGCACT CGAGGCGATC GATTCCGTCA ATGCCGCCAT GGCGAAGCTG ACTGGGCCGC AAAATTTCCG TGAAGGATCC AAGGCCTCTG CCAAAGGAAA CCTTGAACTC GCTCTGAATC ACTTTCGAGA AGCCGTTCAT CGTTCGCCAT CGAGCTTGCC TTATCGAAAA ACGTTAAGGG CGACGGCATG CCGAAAGCAT CGGCAAAACC TGGTCGGCTC ACCCAATGCG AGTAGTGTGA TTATCCGTCT GGTGGTGCTC ATTGCCGATG CGAAGAAGAA ACGGGAGTGG AACCGGATTG ATCGACTGGC CGAAGAAGGC TTGGCGCTGA ATCCGTGGCA TGATCAGCTT CATGCACTGG CAGCCGAGGC CAATCTTGAA AGACGCTACT ATGAAGTGGC TCTTTTTCTT GCCGATACCG CCCGTCAACT CACTCCCGGC AACCACGAAT TTGAGGCGTT GTATCAGAGG GTTCAGGAAG CGATGAGAAA TCCTGCGGCA AAGGATCGTT CCACCGCCGA AACATCGATG GCAAAGCGGA AAGCGGTACA GCGCAAACCG ACCAAAAAAT CGACTTTAAC GCCCGAGACG AAGGCCAAAA CCAAGATTGC CGCGAAAAAA TCTGAAAAGG TGGATAAAGC ACCTCGAAAA GCGTAA
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Protein sequence | MSKRETGAGR SSSPENRPRP QRSANKPTDE DPFSRDEEAA DPWVRASRKL SGSKYPPRST SPKKTERKST SGAGRSGASN PPPARALHGR SASARTGTTR PGRREALEAI DSVNAAMAKL TGPQNFREGS KASAKGNLEL ALNHFREAVH RSPSSLPYRK TLRATACRKH RQNLVGSPNA SSVIIRLVVL IADAKKKREW NRIDRLAEEG LALNPWHDQL HALAAEANLE RRYYEVALFL ADTARQLTPG NHEFEALYQR VQEAMRNPAA KDRSTAETSM AKRKAVQRKP TKKSTLTPET KAKTKIAAKK SEKVDKAPRK A
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