Gene Plim_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1554 
Symbol 
ID9138254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2001236 
End bp2002201 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629586 
Protein GI296121808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.884853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAAC GTGAGACTGG CGCAGGCCGC TCATCTTCTC CAGAGAACCG GCCCAGACCT 
CAGCGGTCTG CAAATAAACC AACGGATGAG GATCCTTTTT CGAGAGACGA AGAAGCGGCA
GATCCCTGGG TGAGAGCATC GCGCAAACTC TCAGGTTCGA AGTATCCTCC ACGAAGTACC
AGCCCGAAAA AGACAGAGAG AAAATCGACT TCGGGGGCCG GACGCAGTGG AGCAAGTAAC
CCACCACCAG CCAGGGCGCT GCATGGGCGA TCGGCATCCG CGCGGACAGG AACGACACGC
CCGGGAAGAC GTGAAGCACT CGAGGCGATC GATTCCGTCA ATGCCGCCAT GGCGAAGCTG
ACTGGGCCGC AAAATTTCCG TGAAGGATCC AAGGCCTCTG CCAAAGGAAA CCTTGAACTC
GCTCTGAATC ACTTTCGAGA AGCCGTTCAT CGTTCGCCAT CGAGCTTGCC TTATCGAAAA
ACGTTAAGGG CGACGGCATG CCGAAAGCAT CGGCAAAACC TGGTCGGCTC ACCCAATGCG
AGTAGTGTGA TTATCCGTCT GGTGGTGCTC ATTGCCGATG CGAAGAAGAA ACGGGAGTGG
AACCGGATTG ATCGACTGGC CGAAGAAGGC TTGGCGCTGA ATCCGTGGCA TGATCAGCTT
CATGCACTGG CAGCCGAGGC CAATCTTGAA AGACGCTACT ATGAAGTGGC TCTTTTTCTT
GCCGATACCG CCCGTCAACT CACTCCCGGC AACCACGAAT TTGAGGCGTT GTATCAGAGG
GTTCAGGAAG CGATGAGAAA TCCTGCGGCA AAGGATCGTT CCACCGCCGA AACATCGATG
GCAAAGCGGA AAGCGGTACA GCGCAAACCG ACCAAAAAAT CGACTTTAAC GCCCGAGACG
AAGGCCAAAA CCAAGATTGC CGCGAAAAAA TCTGAAAAGG TGGATAAAGC ACCTCGAAAA
GCGTAA
 
Protein sequence
MSKRETGAGR SSSPENRPRP QRSANKPTDE DPFSRDEEAA DPWVRASRKL SGSKYPPRST 
SPKKTERKST SGAGRSGASN PPPARALHGR SASARTGTTR PGRREALEAI DSVNAAMAKL
TGPQNFREGS KASAKGNLEL ALNHFREAVH RSPSSLPYRK TLRATACRKH RQNLVGSPNA
SSVIIRLVVL IADAKKKREW NRIDRLAEEG LALNPWHDQL HALAAEANLE RRYYEVALFL
ADTARQLTPG NHEFEALYQR VQEAMRNPAA KDRSTAETSM AKRKAVQRKP TKKSTLTPET
KAKTKIAAKK SEKVDKAPRK A