Gene Plim_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1550 
Symbol 
ID9138250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1997434 
End bp1997784 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629582 
Protein GI296121804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.135754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGTC AGCCCTATAG TTCATTTGCA GTCTATCAAT CCGGCCCATT AACGGTGATT 
GGTTTCGGGA GGAATCGCCC GGATCGACTG GATCTCGGGA TCTGCCGCGA TGAACTCACA
TTGCTGCTCC GTTCGACGAA ATGTCAGTCG CTGGCTGTCG ATCTCACGAA TGTTCGCTTT
GTCCCCAGTG GCATGCTGGG GTTACTTGCC ACTATTCCGA AACTGGGTGT GGAACTGATG
GTGTTCAATC CGAATCCAGA GATTCGCGAA GTTCTTGAAA TCACCCGACT CGACAGCATC
ATGCGGGTTG AGACTGTACC TGTCAGTGGC ATGCTCGCGG GCGAATCCTG A
 
Protein sequence
MSSQPYSSFA VYQSGPLTVI GFGRNRPDRL DLGICRDELT LLLRSTKCQS LAVDLTNVRF 
VPSGMLGLLA TIPKLGVELM VFNPNPEIRE VLEITRLDSI MRVETVPVSG MLAGES