Gene Plim_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1501 
Symbol 
ID9138198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1939491 
End bp1941080 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content53% 
IMG OID 
ProductHeat shock protein 70 
Protein accessionYP_003629533 
Protein GI296121755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.894229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAT TTGTCGACGG ATTGACCGTA GGGATTGACC TCGGAACATC TTCCTCTGGA 
ATCGCGACTT TGGCTGCTGA CGGTCAGCCA GTCGTTATCC CGAATTCCGA TGGTCAAATG
ATCACACCTT CGGTCGTGGT GATCAATGAC AACGGCGAAG TCGTTATCGG CCCGCATGGT
GACTGGATCC GCACCGTGAA CCCGGATCGG GTCATTGTGG GGATCAAGCG TCAGATGGGG
AATCCCGACT ATTCCAAAAT CATCGACGGG AATCCGCTGA ATGCCGAGTT CTTTTCGGCC
CTCATTCTGA TGAAATTAAA GCAGGATGCA GAGGCCAGAC TCGGTGGCCC GGTCACAAAT
GCAGTGATTA CGGTCCCGTA TTATTTCAAT GATCCCTGCC GCCGAGCCAC GATGAATGCC
GGTCAAATTG CTGGCCTCAA CGTGATTGAT CTGCTCAATG AACCAACGGC TGCCACCCTC
GCCTATGCCT GGCAAAAAGG GGATCTCGGT AAGCTTCAGT CAGGGGTGCC TGAGAAAGAA
AAAACAATCC TTGTCTACGA TCTGGGTGGG GGAACATTCG ACGTCACTGT TGTGCGTTAC
TCGGCCATGC AGTTTCGAGT TCTGGCAACG GATGGAGATA CATTTCTCGG TGGTCTCGAT
TGGACCCGGC GCCTCGTTAA CCATATTGCC GAACAATTTC GGCTCAACTA TCGGCTCGAT
CCCCGTGATG ATGCTCGGGC TCGCCTCGCG TTGACGGATG AATGTGATGA AGTGAAACGG
GCACTTTCGG AGTTGCCACA GGCCGCTCTC GAATTCTCAT TCAAAGAAAA AACTCTTAAA
CCCGTGATCA CACGTGCAGA ATTTGAAAGA CTCACCGCCG ATCTTTTGCA GCGAACGCGA
GACACCACAG AATTCGTGCT TGATGGAGTC GGCGTCGCCC CACAGGAACT TGATGAAGTC
TTGTTGATCG GTGGCTCGAC TTATATGACC GGCGTCAGTG CCATGCTCGA AAAGCTGTGC
GGTCGTGTCC CGGTGCGTGT GCTGGATCCC CAGTTAGCAG TCGCCCAGGG AGCCGCTATT
CATGCAGGCA TTCTACAGGC CCGCGAAACG GGTCAAGTGC TTGGGCAAAC AGGGACCGTC
GTCTCGCGAT TAAAATCAGT GGAAGCGGTC GATGTGAATT CCCATTCACT CGGGATTGAG
ATCACTCCTC CCGGAGATCG TAACCGCAAG CTCAATCACA TCATGATCCC TCGAAACACA
GCCCTGCCGT GTGAGTTCAA GCAGCGGTTC GTGACGAACA CGCCGAATCC TGCAGGAATT
CTGGTGCGGC TGCTGGAAGG AGAGACGAAG GAGATTGATG GCTGTACCTT TATTGGCGAT
TTTCGCATCA CCGGTCTGCC AGAGAGTCTC CCTGTAGGTT CACCAGTGGA ATTGACTTAC
CGTTACGATG AAAACCGTCG CATTACAGTG GTTGCCAAAG AACTTACTGG CGGTCGCCAG
GCAACCTGCG AAATCCACTG GAGTTCCAAC AGTGAAGCAG GGACTGTTGA CCAGATGCAG
TCGTTGGTGA ACAGCTTTCA TGTCGACTAA
 
Protein sequence
MTQFVDGLTV GIDLGTSSSG IATLAADGQP VVIPNSDGQM ITPSVVVIND NGEVVIGPHG 
DWIRTVNPDR VIVGIKRQMG NPDYSKIIDG NPLNAEFFSA LILMKLKQDA EARLGGPVTN
AVITVPYYFN DPCRRATMNA GQIAGLNVID LLNEPTAATL AYAWQKGDLG KLQSGVPEKE
KTILVYDLGG GTFDVTVVRY SAMQFRVLAT DGDTFLGGLD WTRRLVNHIA EQFRLNYRLD
PRDDARARLA LTDECDEVKR ALSELPQAAL EFSFKEKTLK PVITRAEFER LTADLLQRTR
DTTEFVLDGV GVAPQELDEV LLIGGSTYMT GVSAMLEKLC GRVPVRVLDP QLAVAQGAAI
HAGILQARET GQVLGQTGTV VSRLKSVEAV DVNSHSLGIE ITPPGDRNRK LNHIMIPRNT
ALPCEFKQRF VTNTPNPAGI LVRLLEGETK EIDGCTFIGD FRITGLPESL PVGSPVELTY
RYDENRRITV VAKELTGGRQ ATCEIHWSSN SEAGTVDQMQ SLVNSFHVD