Gene Plim_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1481 
Symbol 
ID9138178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1908458 
End bp1909696 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content53% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003629513 
Protein GI296121735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.935804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACTATA TCGCTGGCGG ATTATTACTG CTCTCGATGG CTATGGTGCT CATTCACATG 
GTGATTGCGT ACCGTGTGCT GAGATCGTTG AGTCATTGCG CACAGCCTCC TTATCCGGAT
GAGCAATGCC CCAAAGCGAT GGTCGTGATG TGCCTGCGTG GCTCAGATCC TTTTCTGGAA
GCAACACTAC GTTCCATCTT TGCACAGGAT TATCCTCAGT ATGTCGTGAA GCTGATCGTG
GATTCTGTTC ACGATACAGC TTGGGAGATC GTGCACCGCA TCAAGGCAGA ACTCCATGCC
AGTCATGTGA CGATACAACC TCATCTGAAG CGGAGAGCGG GTTGCAGTCT GAAGTGCGGC
AGCCAGATTG AAGCGCTGGA AACGATCGAC CCGTCGATAG AAATGCTGGC ATTTCTTGAC
GCGGATACAG TGCCGCACGC GACCTGGTTG CGAGAATTGG CCGCGGCTTT AAATCAACCG
GGTGTTGGCG CAGCGACGGG AGGACGCTGG TATGCACCGG AAGCTGCCAC ACCTGGGGCG
GTCATGCGCT ATCTGTGGAA TGTGGCAGCA CAGGCCTTGA TGACGGAGCT GCATATTGCC
TGGGGTGGCA CTTTGGCATT TCGCCGGGAG GTTTTTGATC AGTTGAAACT GGCTGAACGA
TGGAGCAAAG CCATCTGTGA GGACACGATG ACACAGGATG CCTTACGAGA GATGAATCTT
AAGGTACAGT TTGTCCCTAC GTTAATGATG GTGAATCGAG AAGATATCAG TGTGAATTCC
TTCCGCCGGT GGGTGACCAG ACAGTTACTC AATACCAGGC TTTATCACTC GAACTGGTGG
TTTGTCTTGT TGCATGGCCT GTCTGTCTTC CTGGTGGTCG AGGGCTCGTT GATCTTCTCT
GTAGTGGCAG CTCTGCGTGG ATATGGAAAC GAGGCCTTAA TGGCGATTGG TGCTGCCGTG
TTGTTCCAAT CGACGCTGTG CCTGCTGCTG TTATTGCTGG AGAGAGCGGT TCTGAGTCTT
TCCAGCCCGC GTCGAAGGCT CTGGGGAGCA TGGTGGGTCT GGGCTTTGAT ACCGGTTTGG
ATGATGTTTG TCCAAACCAT GAATCTCTGG TGTGTCCTGC GAGCTCAATT TGCTCGTCGG
ATCGAATGGC GAGGGGTGAC TTATGAAGTC TTGTCACCCT TCCAGATACG CATTGTCGAA
GAGACGGAAG TTATTGTGTC GGCCACCCAG TCGATTTGA
 
Protein sequence
MYYIAGGLLL LSMAMVLIHM VIAYRVLRSL SHCAQPPYPD EQCPKAMVVM CLRGSDPFLE 
ATLRSIFAQD YPQYVVKLIV DSVHDTAWEI VHRIKAELHA SHVTIQPHLK RRAGCSLKCG
SQIEALETID PSIEMLAFLD ADTVPHATWL RELAAALNQP GVGAATGGRW YAPEAATPGA
VMRYLWNVAA QALMTELHIA WGGTLAFRRE VFDQLKLAER WSKAICEDTM TQDALREMNL
KVQFVPTLMM VNREDISVNS FRRWVTRQLL NTRLYHSNWW FVLLHGLSVF LVVEGSLIFS
VVAALRGYGN EALMAIGAAV LFQSTLCLLL LLLERAVLSL SSPRRRLWGA WWVWALIPVW
MMFVQTMNLW CVLRAQFARR IEWRGVTYEV LSPFQIRIVE ETEVIVSATQ SI