Gene Plim_1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1422 
Symbol 
ID9138117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1822351 
End bp1823457 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629455 
Protein GI296121677 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCACG TGATTCCTGT CACCGAACTC GAACATCTGG AACCTTTTCG CGAGGCCTGG 
ACTCGGCTGA TACAGGAAGA TCCCCGGGCA CAGTTTACGC AGTCTCTGGA GTGGCTCGAA
AATTACTGGA AATGCTTTGG CCACGATAAG TTTCTCGAAT GCCACGTCGT CATGTTCGGT
GACGAGCCCG TTGGGTTTGC ACCGTTGATC CTGAAGAAAG TACCCACTCA CTGGGGAAAT
GTCCGGTTAT TGACATGGCC GCTGGATAGC TGGGGGGTTG GATATCGACC GATCGGCAGG
AATATCACCA GCACGCTCTT CCCCACATTT CGAGCTCTCC ACGGGTCAAA TGATTTCGAT
ATTCTCGACT TGCGGTATCT CTCGGATGAT CCCGGGATGC TGGATCGATG TATGAGTGCT
TGCCGATTGG CACGTACACC AGTCAGTCAT ACTCGCTGGC AAAGATTTGC CTCATTCTCA
ACCGATTGTT ACCAACACTG GGCAACTTAT ATTCATCGGG ATCTTGAAAT CATCGAAGTC
AGTCGAACGG GCCAAGATTC ATTGCAAATC GAGCGGCATC GTCCGGAAGA ATCTACATTG
GCGACCCGTC AGCTTTGGGA ACGTGTCGAG GGCCAGTTTG ATGATTCACT CGTGCCCTAC
TTAAGAGGCT GTGTCGAGGG GGCCGCCAAG CTGGGAATGC TGGATCTCGC AGTGGCCAGT
CGAGGTGGAT TGATCGAGGC CGTGGTGATT GGTCATCATC ATGGAGGCCG GTATGAAGTG
CTGGCAATTT CTCCTGCACG ATCAGCCAGC CAGCAGGCTG CCAGATCATG GCTTTTGGGA
AGAATTCTGC TGGAACTTCC CGAATATGGG GACGATACGG CTCTTTTTCG AGAGGAATAC
CTATCAAGCG TCGGTAATTG GGGAGCCAGA GTCGGCTGGA CGAGTCGTTT GACGAACTTT
CGAAGTCCCC GTTTCTCGAC AAGTCTGCTA AAACTCAGCC GTCAATGGCT GGGTGCTCCA
GCACCCGCCA AGCGTCACAC CATTCGACGT GTGGACATGC AGCAGCCGAC AACGCCACTG
CGTATTCATC AGGTCGATGC ACTGTGA
 
Protein sequence
MYHVIPVTEL EHLEPFREAW TRLIQEDPRA QFTQSLEWLE NYWKCFGHDK FLECHVVMFG 
DEPVGFAPLI LKKVPTHWGN VRLLTWPLDS WGVGYRPIGR NITSTLFPTF RALHGSNDFD
ILDLRYLSDD PGMLDRCMSA CRLARTPVSH TRWQRFASFS TDCYQHWATY IHRDLEIIEV
SRTGQDSLQI ERHRPEESTL ATRQLWERVE GQFDDSLVPY LRGCVEGAAK LGMLDLAVAS
RGGLIEAVVI GHHHGGRYEV LAISPARSAS QQAARSWLLG RILLELPEYG DDTALFREEY
LSSVGNWGAR VGWTSRLTNF RSPRFSTSLL KLSRQWLGAP APAKRHTIRR VDMQQPTTPL
RIHQVDAL